CFinderADM000539 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription factor: MIKC | 8.97E-08 | gene family |
| nucleus | 0.000296457 | GO:0005634 |
| protein dimerization activity | 0.000406865 | GO:0046983 |
| sequence-specific DNA binding transcription factor activity | 0.000814226 | GO:0003700 |
| regulation of transcription, DNA-dependent | 0.001656731 | GO:0006355 |
| DNA binding | 0.00278463 | GO:0003677 |
| iron reduction and absorption | 0.002214934 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g089200.2 | K-box region and MADS-box transcription factor family protein | AT3G02310 (2.00E-79) |
| Solyc03g112320.2 | ferric reduction oxidase 8 | AT5G50160 (4.00E-147) |
| Solyc03g114830.2 | AGAMOUS-like 8 | AT5G60910 (4.00E-83) |
| Solyc05g015750.2 | K-box region and MADS-box transcription factor family protein | AT1G24260 (2.00E-100) |
| Solyc07g061740.2 | ankyrin repeat family protein | AT1G03670 (3.00E-34) |
| Solyc08g005580.2 | ATP-binding cassette 14 | AT1G31770 (0) |
| Solyc09g091220.1 | F-box and associated interaction domains-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000251 | Transcription factor: MIKC nucleus protein dimerization activity sequence-specific DNA binding transcription factor activity regulation of transcription, DNA-dependent DNA binding Starch_and_sucrose_metabolism hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000258 | Transcription factor: MIKC Transcription regulator: Orphans primary metabolic process regulation_of_circadian_rhythm Transcription regulator: Pseudo ARR-B Transcription regulator: C2C2-CO-like nitric oxide biosynthesis (plants) citrulline-nitric oxide cycle Chagas_disease_(American_trypanosomiasis) | details |
| CFinderADM000389 | Transcription factor: RWP-RK membrane homogalacturonan biosynthesis Oxidative_phosphorylation Valine,_leucine_and_isoleucine_degradation formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM000788 | Transcription regulator: HB regulation of transcription, DNA-dependent DNA binding nucleus Transcription factor: MIKC Cytochrome P450: CYP76B acetate conversion to acetyl-CoA β-alanine biosynthesis II iron reduction and absorption fatty acid activation sporopollenin precursor biosynthesis fatty acid β-oxidation II (peroxisome) methyl ketone biosynthesis phosphatidylcholine acyl editing jasmonic acid biosynthesis Methane_metabolism Butanoate_metabolism Oxidative_phosphorylation Monoterpenoid_biosynthesis | details |
| CFinderADM000861 | malate_dehydrogenase_(decarboxylating)_(NAD+)_activity calmodulin binding sequence-specific DNA binding transcription factor activity Transcription factor: LOB Transcription factor: MIKC gluconeogenesis I Carbon_fixation_in_photosynthetic_organisms | details |
| CFinderADM000965 | PPC:1.3.2: Leucine Rich Repeat Receptor VIII Transcription factor: MIKC fructose-bisphosphate aldolase activity Transcription factor: NAC calmodulin binding response to stress regulation of transcription, DNA-dependent glycolysis glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) methylglyoxal degradation I glycolysis I (from glucose 6-phosphate) gluconeogenesis I Calvin-Benson-Bassham cycle Pyruvate_metabolism Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | details |
| CFinderADM001058 | PPC:1.3.1: Receptor-like protein kinase Transcription factor: MIKC oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor methylglyoxal degradation I rosmarinic acid biosynthesis I rosmarinic acid biosynthesis II 4-hydroxybenzoate biosynthesis I (eukaryotes) Tropane,_piperidine_and_pyridine_alkaloid_biosynthesis Pyruvate_metabolism | details |
| CFinderADM001234 | Transcription factor: C2C2-Dof Transcription factor: MIKC regulation of transcription, DNA-dependent mannitol biosynthesis | details |
| CFinderADM001303 | PPC:1.3.2: Leucine Rich Repeat Receptor VIII oxidation-reduction process Cytochrome P450: CYP76B iron reduction and absorption methylglyoxal degradation I TCA cycle variation V (plant) TCA cycle II (plants and fungi) Legionellosis Pyruvate_metabolism Monoterpenoid_biosynthesis Ascorbate_and_aldarate_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |