CFinderADM000547 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nucleobase-containing compound metabolic process | 0.020156122 | GO:0006139 |
| Transcription regulator: SET | 0.04639459 | gene family |
| 3'-5' exonuclease activity | 0.049219596 | GO:0008408 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g079390.2 | SET domain-containing protein | AT4G02020 (0) |
| Solyc03g078300.1 | NB-ARC domain-containing disease resistance protein | AT3G14470 (0) |
| Solyc03g082850.2 | 3\'-5\' exonuclease domain-containing protein | AT5G24340 (1.00E-160) |
| Solyc11g019970.1 | Ubiquitin carboxyl-terminal hydrolase family protein | AT5G48040 (4.00E-126) |
| Solyc11g072590.1 | RNA binding (RRM/RBD/RNP motifs) family protein | AT3G45630 (0) |
| Solyc12g007280.1 | casein kinase I-like 4 | AT4G28860 (2.00E-165) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000546 | RNA polyadenylation E3: RING Transcription regulator: SET polynucleotide adenylyltransferase activity protein_peptidyl-prolyl_isomerization lysine degradation II | details |
| CFinderADM000626 | Transcription regulator: SWI/SNF-BAF60b protein_peptidyl-prolyl_isomerization Transcription regulator: PHD protein folding protein binding peptidyl-prolyl cis-trans isomerase activity Endocrine_resistance Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000733 | fatty acid biosynthetic process small GTPase mediated signal transduction nucleobase-containing compound metabolic process protein domain specific binding 3'-5' exonuclease activity Steroid_biosynthesis | details |
| CFinderADM001025 | Transcription factor: faR1 lysine degradation II Herpes_simplex_infection MicroRNAs_in_cancer beta-Alanine_metabolism | details |
| CFinderADM001188 | PPC:4.1.1: MAP3K PPC:2.1.3: CTR1/EDR1 Kinase acid phosphatase activity protein phosphorylation Transcription factor: NAC phosphate acquisition Platinum_drug_resistance Tuberculosis | details |
| CFinderADM001284 | small GTPase mediated signal transduction protein binding 3-phosphoinositide biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |