CFinderADM000678 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| exosome_(RNase_complex) | 0.000690836 | GO:0000178 |
| nuclear mRNA splicing, via spliceosome | 0.007749008 | GO:0000398 |
| Transcription regulator: SWI/SNF-BAF60b | 0.008282878 | gene family |
| snRNA_binding | 0.033488603 | GO:0017069 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g100570.2 | homolog of nucleolar protein NOP56 | AT1G56110 (0) |
| Solyc04g050480.2 | Nucleic acid-binding, OB-fold-like protein | AT5G38890 (5.00E-78) |
| Solyc06g060150.2 | replication factor C subunit 3 | AT1G77470 (5.00E-157) |
| Solyc08g005590.2 | SWIB/MDM2 domain superfamily protein | AT2G35605 (3.00E-31) |
| Solyc08g082100.2 | Transducin/WD40 repeat-like superfamily protein | AT1G64350 (2.00E-123) |
| Solyc09g075200.2 | spliceosomal protein U1A | AT2G47580 (2.00E-79) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000706 | exosome_(RNase_complex) origin recognition complex SOS_response DNA replication chromatin binding single-stranded DNA binding MicroRNAs_in_cancer | details |
| CFinderADM000802 | 5S rRNA binding translation intracellular ribosome structural constituent of ribosome | details |
Expression profiles
 Show details about module gene expression profiling |