CFinderADM000765 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| metabolic process | 0.00669467 | GO:0008152 |
| transferase activity, transferring acyl groups | 0.015481792 | GO:0016746 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | 0.015481792 | GO:0016624 |
| 2-oxoglutarate decarboxylation to succinyl-CoA | 0.005437596 | plantCyc |
| pyruvate decarboxylation to acetyl CoA | 0.006036036 | plantCyc |
| Lysine_degradation | 0.017711823 | KEGG |
| Central_carbon_metabolism_in_cancer | 0.018789582 | KEGG |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.002617197 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc04g005080.2 | pyruvate dehydrogenase complex E1 alpha subunit | AT1G59900 (0) |
| Solyc07g064800.2 | Dihydrolipoamide succinyltransferase | AT5G55070 (1.00E-166) |
| Solyc08g075340.2 | xyloglucanase 113 | AT2G35610 (0) |
| Solyc09g091820.2 | putative type 1 membrane protein | AT3G24160 (4.00E-59) |
| Solyc10g074870.1 | RNA-binding KH domain-containing protein | AT2G38610 (5.00E-116) |
| Solyc11g022540.1 | transmembrane nine 1 | AT1G10950 (0) |
| Solyc12g008630.1 | Insulinase (Peptidase family M16) protein | AT1G51980 (8.00E-177) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000352 | lipoate biosynthetic process cytoskeleton organization lipoate synthase activity 4 iron, 4 sulfur cluster binding protein glycosylation galactosyltransferase activity actin binding iron-sulfur cluster binding protein ubiquitination lipoate biosynthesis and incorporation I lipoate biosynthesis and incorporation II Lipoic_acid_metabolism Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001203 | proton-transporting ATP synthase complex, catalytic core F(1) hydrogen ion transporting ATP synthase activity, rotational mechanism proton-transporting ATPase activity, rotational mechanism ATP synthesis coupled proton transport Cytochrome P450: CYP76B Monoterpenoid_biosynthesis Non-alcoholic_fatty_liver_disease_(NAFLD) | details |
| CFinderADM001215 | integral to membrane proton-transporting V-type ATPase, V1 domain fructose-bisphosphate aldolase activity hydrogen ion transmembrane transporter activity glycolysis ATP hydrolysis coupled proton transport glycolysis I (from glucose 6-phosphate) gluconeogenesis I Calvin-Benson-Bassham cycle sucrose biosynthesis I (from photosynthesis) glycolysis IV (plant cytosol) Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | details |
| CFinderADM001263 | structural molecule activity intracellular protein transport vesicle-mediated transport vesicle docking Golgi vesicle transport malate_dehydrogenase_(decarboxylating)_(NAD+)_activity clathrin coat of coated pit COPI vesicle coat clathrin coat of trans-Golgi network vesicle membrane coat exocytosis endoplasmic reticulum NAD binding TCA cycle variation V (plant) gluconeogenesis I Carbon_fixation_in_photosynthetic_organisms formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |