CFinderADM000783 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| base-excision repair | 0.003823153 | GO:0006284 |
| DNA-3-methyladenine glycosylase activity | 0.020693072 | GO:0008725 |
| putrescine biosynthesis IV | 0.004830497 | plantCyc |
| putrescine biosynthesis II | 0.004830497 | plantCyc |
| Base_excision_repair | 0.013251787 | KEGG |
| Arginine_and_proline_metabolism | 0.013251787 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g010130.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | AT1G68920 (2.00E-83) |
| Solyc01g099880.2 | Nodulin MtN3 family protein | AT4G15920 (9.00E-59) |
| Solyc02g082120.2 | DNA glycosylase superfamily protein | AT5G44680 (1.00E-109) |
| Solyc07g016080.2 | ||
| Solyc07g066000.2 | amino acid permease 5 | |
| Solyc12g013520.1 | ||
| Solyc12g087840.1 | RING/U-box superfamily protein | AT1G72220 (3.00E-37) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000016 | transmembrane transport membrane integral to membrane pectate lyase activity cation transport solute:hydrogen antiporter activity protein phosphorylation protein kinase activity exocytosis phospholipid binding response to stress vesicle docking enzyme inhibitor activity PPC:5.2.1: Other Kinase Transcription factor: LIM nutrient reservoir activity cell wall transferase activity, transferring glycosyl groups cell wall modification pectinesterase activity Pentose_and_glucuronate_interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000486 | Cytochrome P450: CYP716H base-excision repair metabolic process betulinate biosynthesis ursolate biosynthesis valine biosynthesis justicidin B biosynthesis matairesinol biosynthesis CDP-diacylglycerol biosynthesis I triacylglycerol biosynthesis Base_excision_repair Fat_digestion_and_absorption Pantothenate_and_CoA_biosynthesis | details |
| CFinderADM000487 | Cytochrome P450: CYP716H base-excision repair metabolic process DNA-3-methyladenine glycosylase activity transferase activity, transferring acyl groups amino acid binding betulinate biosynthesis ursolate biosynthesis valine biosynthesis justicidin B biosynthesis matairesinol biosynthesis CDP-diacylglycerol biosynthesis I triacylglycerol biosynthesis Pantothenate_and_CoA_biosynthesis Base_excision_repair Fat_digestion_and_absorption | details |
| CFinderADM000782 | Cytochrome P450: CYP82U base-excision repair trans-cinnamoyl-CoA biosynthesis phenylpropanoid biosynthesis, initial reactions suberin monomers biosynthesis Base_excision_repair Phenylpropanoid_biosynthesis | details |
| CFinderADM000907 | Cytochrome P450: CYP82U transporter activity DNA-3-methyladenine glycosylase activity benzoate biosynthesis III (CoA-dependent, non-β-oxidative) fatty acid α-oxidation I Chloroalkane_and_chloroalkene_degradation Base_excision_repair | details |
Expression profiles
 Show details about module gene expression profiling |