CFinderADM000894 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| tryptophan biosynthesis | 0.005027858 | plantCyc |
| Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.010034033 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g098730.2 | ||
| Solyc01g107170.2 | C2H2 and C2HC zinc fingers superfamily protein | |
| Solyc01g107740.2 | Calcium-dependent lipid-binding (CaLB domain) family protein | AT4G34150 (2.00E-55) |
| Solyc03g112340.1 | RING/U-box superfamily protein | AT5G27420 (2.00E-53) |
| Solyc06g036170.1 | SCARECROW-like 8 | AT5G52510 (5.00E-112) |
| Solyc07g064280.2 | tryptophan synthase beta-subunit 1 | AT5G54810 (0) |
| Solyc12g099310.1 | ubiquitin-conjugating enzyme 32 | AT3G17000 (2.00E-98) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000587 | protein phosphatase type 2A complex polysaccharide catabolic process protein phosphatase type 2A regulator activity beta-amylase activity Transcription regulator: GNAT N-acetyltransferase_activity signal transduction UDP-α-D-glucuronate biosynthesis (from UDP-glucose) hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000848 | details | |
| CFinderADM001107 | alternative_oxidase_activity E2: UBC ATP binding UDP-L-arabinose biosynthesis II (from L-arabinose) aerobic respiration III (alternative oxidase pathway) Amino_sugar_and_nucleotide_sugar_metabolism | details |
| CFinderADM001134 | microtubule-based process microtubule Transcription factor: C2H2 thioredoxin pathway Selenocompound_metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001217 | proton-transporting ATP synthase complex, catalytic core F(1) proton-transporting ATPase activity, rotational mechanism hydrogen ion transporting ATP synthase activity, rotational mechanism ATP synthesis coupled proton transport pyridoxal phosphate binding histidine biosynthesis octanoyl-ACP biosynthesis (mitochondria, yeast) fatty acid biosynthesis initiation I tryptophan biosynthesis Fatty_acid_biosynthesis Fatty_acid_biosynthesis Novobiocin_biosynthesis Phenylalanine,_tyrosine_and_tryptophan_biosynthesis adenosine ribonucleotides de novo biosynthesis | details |
| CFinderADM001320 | Transcription factor: MIKC protein dimerization activity sequence-specific DNA binding transcription factor activity nucleus regulation of transcription, DNA-dependent DNA binding Transcription factor: C2H2 formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |