CFinderADM000959 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nucleus | 0.004107567 | GO:0005634 |
| Transcription factor: CAMTA | 0.004229972 | gene family |
| Transcription factor: HSF | 0.008143724 | gene family |
| phosphatidylinositol metabolic process | 0.023236731 | GO:0046488 |
| lysine degradation II | 0.018817186 | plantCyc |
| D-myo-inositol (1,4,5)-trisphosphate biosynthesis | 0.020592545 | plantCyc |
| 3-phosphoinositide biosynthesis | 0.020592545 | plantCyc |
| Lysine_degradation | 0.008855911 | KEGG |
| Bile_secretion | 0.008855911 | KEGG |
| Choline_metabolism_in_cancer | 0.031178396 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g099810.2 | SERINE-ARGININE PROTEIN 30 | AT1G09140 (6.00E-57) |
| Solyc01g104140.2 | Phosphatidylinositol-4-phosphate 5-kinase family protein | AT1G60890 (0) |
| Solyc02g071980.2 | RING/FYVE/PHD-type zinc finger family protein | AT1G29800 (3.00E-179) |
| Solyc03g097120.2 | heat shock factor 3 | AT5G16820 (3.00E-95) |
| Solyc06g064640.2 | alpha/beta-Hydrolases superfamily protein | AT4G10030 (4.00E-135) |
| Solyc07g017610.2 | lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme | AT4G33150 (0) |
| Solyc12g099340.1 | calmodulin binding;transcription regulators | AT4G16150 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000261 | Cytochrome P450: CYP714E PPC:2.2.1: Unknown Function Kinase Type_I_diabetes_mellitus Drug_metabolism_-_cytochrome_P450 Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000272 | autophagy protein binding E3: RING protein ubiquitination Bile_secretion | details |
| CFinderADM000474 | glucose metabolic process protein dephosphorylation intracellular protein transport heme biosynthetic process glucose-6-phosphate dehydrogenase activity protein serine/threonine phosphatase activity ferrochelatase activity PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) pentose phosphate pathway (oxidative branch) I heme biosynthesis I (aerobic) glycerophosphodiester degradation | details |
| CFinderADM000501 | Transcription factor: NAC regulation of transcription, DNA-dependent DNA binding protein phosphorylation protein kinase activity PPC:1.6.4: RKF3 Like Kinase PPC:2.1.3: CTR1/EDR1 Kinase Transcription factor: CAMTA phosphate acquisition Endocrine_resistance | details |
| CFinderADM000600 | E3 adaptor: F-box fatty acid metabolic process phosphogluconate dehydrogenase (decarboxylating) activity 3-hydroxyacyl-CoA_dehydrogenase_activity endoplasmic reticulum membrane pyridine nucleotide cycling (plants) Benzoate_degradation Bile_secretion | details |
| CFinderADM000621 | Cytochrome P450: CYP714E DUB: OTU protein kinase C-activating G-protein coupled receptor signaling pathway intracellular_signal_transduction phosphatidate metabolism, as a signaling molecule gibberellin inactivation III (epoxidation) lysine degradation II choline biosynthesis III Choline_metabolism_in_cancer Lysine_degradation | details |
| CFinderADM000702 | mitochondrial_fission E3: RING 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Bile_secretion | details |
| CFinderADM000723 | PPC:1.11.1: Legume Lectin Domain Kinase protein kinase C-activating G-protein coupled receptor signaling pathway cellular amino acid metabolic process diacylglycerol kinase activity phenylalanine biosynthesis (cytosolic, plants) phosphatidate metabolism, as a signaling molecule Bile_secretion | details |
| CFinderADM000772 | ferrochelatase activity heme biosynthetic process PPC:4.2.1: Calcium Dependent Protein Kinase E3 adaptor: Cullin ubiquitin protein ligase binding protein kinase activity heme biosynthesis I (aerobic) phosphatidylcholine acyl editing phospholipases Bile_secretion | details |
| CFinderADM000773 | PPC:4.2.1: Calcium Dependent Protein Kinase phosphatidylcholine acyl editing phospholipases Bile_secretion Regulation_of_lipolysis_in_adipocyte | details |
| CFinderADM000832 | Transcription regulator: Orphans exocyst acyl-CoA dehydrogenase activity two-component sensor activity oxidoreductase activity, acting on the CH-CH group of donors ion channel activity Parkinson's_disease Bile_secretion Alzheimer's_disease Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000860 | exocyst ion transport exocytosis ion channel activity Bile_secretion hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000864 | exocyst PPC:2.1.3: CTR1/EDR1 Kinase nucleoside_diphosphate_phosphorylation CTP biosynthetic process GTP biosynthetic process UTP biosynthetic process CMP phosphorylation purine deoxyribonucleosides salvage pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II guanosine ribonucleotides de novo biosynthesis UTP and CTP de novo biosynthesis guanosine deoxyribonucleotides de novo biosynthesis I adenosine deoxyribonucleotides de novo biosynthesis | details |
| CFinderADM000887 | E3: RING Transcription factor: C2H2 Bile_secretion | details |
| CFinderADM000958 | L-phenylalanine catabolic process tyrosine metabolic process Transcription factor: CAMTA homogentisate 1,2-dioxygenase activity Styrene_degradation Bile_secretion Taste_transduction | details |
| CFinderADM001062 | pyruvate metabolic process phosphorylation Cytochrome P450: CYP71A pyruvate, phosphate dikinase activity transferase activity, transferring phosphorus-containing groups adenine and adenosine salvage II glutamate degradation IV choline biosynthesis III glutamine biosynthesis III Drug_metabolism_-_cytochrome_P450 Type_I_diabetes_mellitus Carbon_fixation_pathways_in_prokaryotes | details |
| CFinderADM001095 | PPC:4.1.4: MAP2K protein import into nucleus phosphatidylinositol metabolic process ADP_binding protein transporter activity phosphatidylinositol phosphate kinase activity acid phosphatase activity phosphate acquisition 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Endocrine_resistance Tuberculosis Choline_metabolism_in_cancer | details |
| CFinderADM001133 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 4-hydroxyphenylpyruvate dioxygenase activity microtubule aromatic amino acid family metabolic process microtubule-based process vitamin E biosynthesis (tocotrienols) plastoquinol-9 biosynthesis I phenylalanine biosynthesis (cytosolic, plants) thioredoxin pathway Bile_secretion Selenocompound_metabolism Ubiquinone_and_other_terpenoid-quinone_biosynthesis | details |
| CFinderADM001143 | mitochondrial_fission folic acid binding PPC:5.2.1: Other Kinase transferase activity acid phosphatase activity folate transformations II phosphate acquisition Cell_cycle_-_yeast Bile_secretion One_carbon_pool_by_folate Tuberculosis | details |
| CFinderADM001144 | Transcription factor: EIL Transcription factor: PLATZ Bile_secretion | details |
| CFinderADM001145 | Transcription regulator: TRAF SOCS/VHL/BC-box: 3_box Transcription factor: PLATZ E3 adaptor: BTB Bile_secretion | details |
| CFinderADM001150 | cellular amino acid metabolic process lyase activity phenylalanine biosynthesis (cytosolic, plants) Bile_secretion | details |
| CFinderADM001183 | potassium_ion_transmembrane_transport protein transport potassium ion transmembrane transporter activity transaminase activity proline biosynthesis III arginine degradation I (arginase pathway) arginine degradation VI (arginase 2 pathway) L-Nδ-acetylornithine biosynthesis Bile_secretion Arginine_and_proline_metabolism | details |
| CFinderADM001196 | vacuolar transport DUB: OTU Transcription factor: trihelix Bile_secretion | details |
| CFinderADM001224 | oxidation-reduction process Cytochrome P450: CYP89A oxidoreductase activity phosphatidylinositol metabolic process fatty acid metabolic process 3-hydroxyacyl-CoA_dehydrogenase_activity phosphatidylinositol phosphate kinase activity guanosine nucleotides degradation I unsaturated, even numbered fatty acid β-oxidation guanosine nucleotides degradation II lysine degradation II D-myo-inositol (1,4,5)-trisphosphate biosynthesis adenosine nucleotides degradation I methyl ketone biosynthesis fatty acid β-oxidation II (peroxisome) poly-hydroxy fatty acids biosynthesis 3-phosphoinositide biosynthesis jasmonic acid biosynthesis Caprolactam_degradation PPAR_signaling_pathway Lysine_degradation Alzheimer's_disease Peroxisome Choline_metabolism_in_cancer | details |
| CFinderADM001251 | mitochondrial_fission cellular aromatic compound metabolic process ferrous iron binding intracellular protein transport Bile_secretion | details |
| CFinderADM001267 | Transcription factor: HSF phosphatidylinositol metabolic process phosphatidylinositol phosphate kinase activity lysine degradation II D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3-phosphoinositide biosynthesis Bile_secretion Lysine_degradation Choline_metabolism_in_cancer | details |
Expression profiles
 Show details about module gene expression profiling |