CFinderADM000982 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| structural constituent of ribosome | 0.00557635 | GO:0003735 |
| translation | 0.005917057 | GO:0006412 |
| nucleosome assembly | 0.00801538 | GO:0006334 |
| Transcription factor: NF-YB | 0.014482523 | gene family |
| Transcription factor: MYB-RELATED | 0.019587076 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g106940.2 | telomere repeat binding factor 1 | AT1G49950 (2.00E-72) |
| Solyc02g086730.1 | ribosomal protein L12-C | AT3G27830 (2.00E-43) |
| Solyc04g049910.2 | nuclear factor Y, subunit B8 | AT3G53340 (2.00E-55) |
| Solyc06g083110.1 | YGGT family protein | AT4G27990 (4.00E-54) |
| Solyc11g008980.1 | Uncharacterised conserved protein ycf60 | AT2G47840 (1.00E-45) |
| Solyc11g068820.1 | ribosomal protein large subunit 27 | AT5G40950 (1.00E-59) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000938 | lipoate biosynthetic process 4 iron, 4 sulfur cluster binding lipoate synthase activity Transcription factor: GeBP nucleosome assembly nucleosome Transcription factor: MYB-RELATED Photosynthesis | details |
| CFinderADM001030 | NAD biosynthetic process nucleosome assembly nucleosome biosynthetic process Transcription factor: MYB-RELATED NAD biosynthesis I (from aspartate) pyridine nucleotide cycling (plants) Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM001163 | phosphatidylinositol phospholipase C activity Transcription factor: MYB-RELATED intracellular_signal_transduction nucleosome assembly nucleosome signal transduction lipid metabolic process D-myo-inositol-5-phosphate metabolism D-myo-inositol (1,4,5)-trisphosphate biosynthesis phosphatidate metabolism, as a signaling molecule phospholipases | details |
Expression profiles
 Show details about module gene expression profiling |