CFinderADM001227 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| translational initiation | 0.018693945 | GO:0006413 |
| cytoplasm | 0.031217294 | GO:0005737 |
| cell redox homeostasis | 0.038272182 | GO:0045454 |
| thioredoxin pathway | 0.008634485 | plantCyc |
| Selenocompound_metabolism | 0.011431887 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g065840.2 | RNI-like superfamily protein | AT3G18150 (3.00E-26) |
| Solyc03g005870.2 | eukaryotic translation initiation factor 4E | AT4G18040 (2.00E-83) |
| Solyc04g015180.2 | RNA polymerase II, Rpb4, core protein | AT4G15950 (3.00E-33) |
| Solyc09g074570.1 | Glutaredoxin family protein | AT2G47880 (2.00E-32) |
| Solyc09g097780.2 | ||
| Solyc11g012820.1 | ATPase family associated with various cellular activities (AAA) | AT1G21690 (8.00E-170) |
| Solyc12g014450.1 | Protein of unknown function (DUF3537) | AT3G20300 (8.00E-138) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000510 | centromere_complex_assembly kinetochore transcription factor TFIID complex transcription initiation from RNA polymerase II promoter | details |
| CFinderADM000541 | translational initiation cytoplasm transcription, DNA-dependent Base_excision_repair | details |
| CFinderADM001002 | putrescine biosynthetic process cell redox homeostasis electron carrier activity protein-arginine_deiminase_activity protein disulfide oxidoreductase activity PPC:2.1.2: Ankyrin Repeat Domain Kinase thioredoxin pathway putrescine biosynthesis II Selenocompound_metabolism Arginine_and_proline_metabolism | details |
| CFinderADM001017 | protein-arginine_deiminase_activity phosphatidylethanolamine_binding putrescine biosynthetic process regulation_of_flower_development photoperiodism,_flowering putrescine biosynthesis II Chlorocyclohexane_and_chlorobenzene_degradation Arginine_and_proline_metabolism | details |
| CFinderADM001100 | putrescine biosynthetic process protein-arginine_deiminase_activity nucleosome assembly nucleosome cell redox homeostasis putrescine biosynthesis II thioredoxin pathway Arginine_and_proline_metabolism Selenocompound_metabolism | details |
| CFinderADM001315 | integral to membrane transmembrane_transporter_activity Chlorocyclohexane_and_chlorobenzene_degradation Pentose_phosphate_pathway Amino_sugar_and_nucleotide_sugar_metabolism | details |
| CFinderADM001317 | Transcription regulator: LUG | details |
Expression profiles
 Show details about module gene expression profiling |