TissueCFM000117 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| vesicle_fusion_with_Golgi_apparatus | 0.004930044 | GO:0048280 |
| Golgi vesicle transport | 0.006571499 | GO:0048193 |
| Golgi membrane | 0.008704533 | GO:0000139 |
| isomerase activity | 0.016769177 | GO:0016853 |
| protein transporter activity | 0.016769177 | GO:0008565 |
| UDP-glucose biosynthesis | 0.011486886 | plantCyc |
| sucrose biosynthesis II | 0.011486886 | plantCyc |
| sucrose degradation III (sucrose invertase) | 0.011486886 | plantCyc |
| glucose and glucose-1-phosphate degradation | 0.011486886 | plantCyc |
| starch biosynthesis | 0.011809641 | plantCyc |
| Glycolysis / Gluconeogenesis | 0.002373964 | KEGG |
| Transcriptional misregulation in cancers | 0.000863707 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g108150.2 | ARP protein (REF) | AT1G49670 (0) |
| Solyc02g067860.2 | aldose 1-epimerase family protein | AT5G14500 (9.00E-138) |
| Solyc03g117190.1 | ||
| Solyc08g008180.1 | AT1G64140 (1.00E-154) | |
| Solyc08g081410.2 | golgin candidate 6 | AT3G27530 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000776 | L-phenylalanine catabolic process tyrosine metabolic process homogentisate 1,2-dioxygenase activity protein ubiquitination Ubiquitin_Proteasome_system, E3: RING Styrene degradation | details |
| TissueCFM000940 | cellular metabolic process vesicle_fusion_with_Golgi_apparatus Golgi vesicle transport Golgi membrane protein transporter activity intracellular protein transport Transcription_related, Transcription factor: faR1 triacylglycerol biosynthesis Fat digestion and absorption | details |
| TissueCFM001089 | vesicle_fusion_with_Golgi_apparatus Golgi vesicle transport Golgi membrane protein transporter activity intracellular protein transport Transcription_related, Transcription factor: CAMTA Ubiquitin_Proteasome_system, DUB: USP Epstein-Barr virus infection | details |
| TissueCFM001407 | acid phosphatase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds nitrogen compound metabolic process Protein_kinases_phosphatases, PPC:4.1.4: MAP2K uracil degradation I (reductive) phosphate acquisition Transcriptional misregulation in cancers Tuberculosis Drug metabolism - other enzymes Endocrine resistance | details |
Expression profiles
 Show details about module gene expression profiling |