TissueCFM000539 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Two-component system | 0.002445057 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g080330.2 | Bax inhibitor-1 family protein | AT4G15470 (2.00E-76) |
| Solyc02g071180.2 | Kinase-related protein of unknown function (DUF1296) | AT1G29370 (2.00E-147) |
| Solyc03g096090.2 | AT2G40070 (4.00E-57) | |
| Solyc06g007640.2 | FRIGIDA-like protein | AT5G48385 (4.00E-165) |
| Solyc08g008030.2 | AT hook motif DNA-binding family protein | AT1G63470 (5.00E-50) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000173 | Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 Dioxin degradation | details |
| TissueCFM000402 | nucleic acid binding large ribosomal subunit | details |
| TissueCFM000413 | Two-component system | details |
| TissueCFM000540 | activation of protein kinase activity regulation_of_mitotic_spindle_organization spindle microtubule Two-component system | details |
| TissueCFM000667 | transcription, DNA-dependent DNA-directed RNA polymerase activity Epstein-Barr virus infection | details |
| TissueCFM000671 | kinesin complex microtubule-based movement transcription, DNA-dependent small protein activating enzyme activity Ubiquitin_Proteasome_system, E1: ThiF Viral carcinogenesis | details |
| TissueCFM000672 | protein glycosylation nucleobase-containing compound metabolic process microtubule-based movement kinesin complex formation of glycosidic bonds, GlycosylTransferases: GTnc Glycosaminoglycan biosynthesis - heparan sulfate / heparin Viral carcinogenesis | details |
| TissueCFM000691 | ATP-dependent DNA helicase activity ATP binding DNA binding kinesin complex hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides chromatin binding microtubule-based movement Ubiquitin_Proteasome_system, E3: RING Transcription_related, Transcription regulator: PHD Transcription_related, Transcription regulator: SNF2 Viral carcinogenesis | details |
| TissueCFM000692 | transcriptional_repressor_complex cell cycle transcription, DNA-dependent Transcription_related, Transcription regulator: SNF2 | details |
| TissueCFM000880 | mRNA guanylyltransferase activity tetrahydrofolylpolyglutamate synthase activity 7-methylguanosine mRNA capping folic acid-containing compound biosynthetic process Transcription_related, Transcription regulator: LUG Transcription_related, Transcription factor: faR1 tetrahydrofolate biosynthesis tetrahydrofolate biosynthesis II mRNA surveillance pathway Folate biosynthesis | details |
| TissueCFM000897 | DNA binding lipid binding Protein_kinases_phosphatases, PPC:1.13.1: Leucine Rich Repeat Kinase VII Transcription_related, Transcription factor: OFP Transcription_related, Transcription factor: C2C2-Dof Transcription_related, Transcription regulator: HB geranyl acetate biosynthesis volatile benzenoid biosynthesis I (ester formation) | details |
| TissueCFM000902 | serine-type endopeptidase activity | details |
| TissueCFM000915 | DNA-directed DNA polymerase activity mismatched DNA binding DNA replication Mismatch repair | details |
| TissueCFM000943 | Transcription_related, Transcription regulator: SET MicroRNAs in cancer | details |
| TissueCFM000944 | DNA-directed DNA polymerase activity | details |
| TissueCFM001009 | lipid-A-disaccharide synthase activity positive regulation of catalytic activity protein processing lipid A biosynthetic process small protein activating enzyme activity large ribosomal subunit formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E1: ThiF lipid IVA biosynthesis Homologous recombination Lipopolysaccharide biosynthesis | details |
| TissueCFM001110 | protein metabolic process gibberellin biosynthesis III (early C-13 hydroxylation) | details |
| TissueCFM001147 | protein processing Transcription_related, Transcription regulator: LUG Transcription_related, Transcription regulator: C3H | details |
| TissueCFM001148 | regulation_of_mitotic_spindle_organization activation of protein kinase activity spindle microtubule Transcription_related, Transcription factor: GRAS Transcription_related, Transcription factor: B3 | details |
| TissueCFM001303 | transcription, DNA-dependent DNA-directed RNA polymerase activity Ubiquitin_Proteasome_system, E3: UBR-box Epstein-Barr virus infection Taste transduction | details |
| TissueCFM001402 | small GTPase mediated signal transduction Transcription_related, Transcription factor: C2C2-GATA | details |
| TissueCFM001454 | rRNA processing lipid biosynthetic process fatty acid biosynthetic process DNA binding lipid binding metalloendopeptidase activity Transcription_related, Transcription factor: C2C2-Dof adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 Transcription_related, Transcription regulator: HB glucose and glucose-1-phosphate degradation L-ascorbate biosynthesis I (L-galactose pathway) very long chain fatty acid biosynthesis I Biosynthesis of unsaturated fatty acids | details |
Expression profiles
 Show details about module gene expression profiling |