TissueCFM000670 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| transferase activity, transferring acyl groups | 0.033538353 | GO:0016746 |
| CDP-diacylglycerol biosynthesis I | 0.010782048 | plantCyc |
| triacylglycerol biosynthesis | 0.01377006 | plantCyc |
| Glycerophospholipid metabolism | 0.008751237 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g083180.2 | AT2G17695 (4.00E-73) | |
| Solyc03g033380.2 | SPla/RYanodine receptor (SPRY) domain-containing protein | AT1G35470 (4.00E-160) |
| Solyc03g117320.2 | ribosomal protein L3 plastid | AT3G17465 (2.00E-129) |
| Solyc05g008870.2 | Nucleotidylyl transferase superfamily protein | AT2G01220 (8.00E-158) |
| Solyc08g082340.2 | glycerol-3-phosphate acyltransferase 9 | AT5G60620 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000335 | protein_farnesyltransferase_complex regulation_of_cell_proliferation protein_farnesylation protein_prenylation cellular metabolic process protein prenyltransferase activity Terpenoid backbone biosynthesis | details |
| TissueCFM000554 | endocytosis L-methionine salvage from methylthioadenosine metal ion binding ATP-dependent peptidase activity FAD binding Transcription_related, Transcription regulator: C3H S-methyl-5-thio-α-D-ribose 1-phosphate degradation Cysteine and methionine metabolism | details |
| TissueCFM000821 | protein arginylation actin cytoskeleton Arp2/3_protein_complex regulation of actin filament polymerization arginyltransferase activity Arp2/3_complex-mediated_actin_nucleation protein binding formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII dolichyl-diphosphooligosaccharide biosynthesis Various types of N-glycan biosynthesis | details |
| TissueCFM001155 | purine nucleotide biosynthetic process adenylosuccinate synthase activity IMP dehydrogenase activity transferase activity, transferring acyl groups guanosine ribonucleotides de novo biosynthesis CDP-diacylglycerol biosynthesis I triacylglycerol biosynthesis adenosine nucleotides degradation I adenosine ribonucleotides de novo biosynthesis Alanine, aspartate and glutamate metabolism Glycerophospholipid metabolism Drug metabolism - other enzymes | details |
| TissueCFM001348 | vesicle docking involved in exocytosis vesicle-mediated transport | details |
| TissueCFM001426 | ATP-dependent peptidase activity galactosyltransferase activity protein glycosylation helicase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Glycosaminoglycan biosynthesis - heparan sulfate / heparin Herpes simplex infection | details |
| TissueCFM001453 | vesicle docking involved in exocytosis vesicle-mediated transport | details |
Expression profiles
 Show details about module gene expression profiling |