TissueCFM000683 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| hydroxymethylglutaryl-CoA synthase activity | 0.002158895 | GO:0004421 |
| isoprenoid biosynthetic process | 0.003450454 | GO:0008299 |
| aspartic-type endopeptidase activity | 0.025096676 | GO:0004190 |
| Protein_kinases_phosphatases, PPC:2.1.5: ATN1 Like Family | 0.000431829 | gene family |
| mevalonate pathway I | 0.002876041 | plantCyc |
| Terpenoid backbone biosynthesis | 0.011410557 | KEGG |
| Cell cycle - yeast | 0.011410557 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g089320.2 | alpha/beta-Hydrolases superfamily protein | AT3G30380 (2.00E-127) |
| Solyc02g093410.2 | Protein kinase superfamily protein | AT5G50180 (1.00E-160) |
| Solyc06g007620.2 | Protein of unknown function, DUF538 | AT3G07470 (7.00E-33) |
| Solyc08g007790.2 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | AT4G11820 (0) |
| Solyc10g012430.2 | SIGNAL PEPTIDE PEPTIDASE-LIKE 4 | AT1G01650 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001019 | protein phosphorylation protein kinase activity ion transport Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase formation of glycosidic bonds, GlycosylTransferases: GTnc phosphate acquisition Platinum drug resistance Glycosphingolipid biosynthesis - lacto and neolacto series Tuberculosis | details |
| TissueCFM001275 | Transcription_related, Transcription factor: RWP-RK Transcription_related, Transcription factor: TUB | details |
Expression profiles
 Show details about module gene expression profiling |