TissueCFM000759 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| electron carrier activity | 0.00525575 | GO:0009055 |
| pyruvate dehydrogenase (acetyl-transferring) activity | 0.00626934 | GO:0004739 |
| acetyl-CoA_biosynthetic_process_from_pyruvate | 0.010155294 | GO:0006086 |
| strictosidine synthase activity | 0.011487999 | GO:0016844 |
| pyruvate decarboxylation to acetyl CoA | 0.010350618 | plantCyc |
| thioredoxin pathway | 0.01110851 | plantCyc |
| Selenocompound metabolism | 0.026131572 | KEGG |
| Indole alkaloid biosynthesis | 0.026131572 | KEGG |
| Central carbon metabolism in cancer | 0.026131572 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g009900.2 | Thioredoxin superfamily protein | AT5G14070 (6.00E-26) |
| Solyc01g111660.2 | plasma membrane intrinsic protein 3 | AT4G35100 (1.00E-142) |
| Solyc03g097680.2 | Transketolase family protein | AT5G50850 (9.00E-179) |
| Solyc07g055750.2 | Calcium-dependent phosphotriesterase superfamily protein | AT3G57030 (2.00E-116) |
| Solyc07g056150.2 | RAB GTPase homolog B1C | AT4G17170 (4.00E-98) |
| Solyc12g042580.1 | early nodulin-like protein 17 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000758 | strictosidine synthase activity Transcription_related, Transcription factor: TCP stearate biosynthesis II (bacteria and plants) cis-vaccenate biosynthesis fatty acid elongation -- saturated thioredoxin pathway Selenocompound metabolism Biotin metabolism Bisphenol degradation Indole alkaloid biosynthesis | details |
| TissueCFM001255 | phosphatidylinositol metabolic process phosphatidylinositol phosphate kinase activity integral to membrane 3-phosphoinositide biosynthesis Regulation of actin cytoskeleton | details |
| TissueCFM001367 | transport Transcription_related, Transcription factor: TCP guanosine ribonucleotides de novo biosynthesis Purine metabolism | details |
| TissueCFM001402 | small GTPase mediated signal transduction Transcription_related, Transcription factor: C2C2-GATA | details |
| TissueCFM001467 | glucose-6-phosphate isomerase activity gluconeogenesis protein tyrosine/serine/threonine phosphatase activity glycolysis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 adenosine nucleotides degradation I GDP-mannose biosynthesis sucrose biosynthesis I (from photosynthesis) starch degradation II valine degradation I sucrose degradation III (sucrose invertase) sucrose biosynthesis II starch biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) beta-Alanine metabolism Amino sugar and nucleotide sugar metabolism | details |
| TissueCFM001480 | transporter activity transport formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: TCP | details |
| TissueCFM001493 | proton-transporting V-type ATPase, V0 domain ATP hydrolysis coupled proton transport hydrogen ion transmembrane transporter activity transporter activity adenosine nucleotides degradation I | details |
Expression profiles
 Show details about module gene expression profiling |