TissueCFM000787 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein neddylation | 0.001900073 | GO:0045116 |
| acid-amino acid ligase activity | 0.003755729 | GO:0016881 |
| NEDD8_activating_enzyme_activity | 0.003755729 | GO:0019781 |
| phospholipid biosynthetic process | 0.005696119 | GO:0008654 |
| phosphotransferase activity, for other substituted phosphate groups | 0.006258198 | GO:0016780 |
| small protein activating enzyme activity | 0.01219646 | GO:0008641 |
| Ubiquitin_Proteasome_system, E1: ThiF | 0.002243764 | gene family |
| cardiolipin biosynthesis II | 0.003164966 | plantCyc |
| phosphatidylglycerol biosynthesis II (non-plastidic) | 0.003164966 | plantCyc |
| phosphatidylglycerol biosynthesis I (plastidic) | 0.003164966 | plantCyc |
| Glycerophospholipid metabolism | 0.010492123 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g079840.2 | E1 C-terminal related 1 | AT5G19180 (0) |
| Solyc04g009580.2 | phosphatidylglycerolphosphate synthase 1 | AT2G39290 (3.00E-77) |
| Solyc05g054150.2 | RAB GTPase homolog A5A | AT5G47520 (1.00E-103) |
| Solyc07g009140.2 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | AT4G24820 (0) |
| Solyc08g068220.2 | Ribosomal protein L27 family protein | AT5G15220 (3.00E-51) |
| Solyc09g009770.2 | IQ calmodulin-binding motif family protein | AT3G52870 (2.00E-149) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000259 | transcription factor TFIID complex kinetochore U4/U6_x_U5_tri-snRNP_complex Pantothenate and CoA biosynthesis | details |
| TissueCFM000784 | phosphotransferase activity, for other substituted phosphate groups oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water phospholipid biosynthetic process fatty acid biosynthetic process oxidation-reduction process lipid metabolic process phosphatidylglycerol biosynthesis I (plastidic) cardiolipin biosynthesis II α-linolenate biosynthesis phosphatidylglycerol biosynthesis II (non-plastidic) phospholipid desaturation sphingolipid biosynthesis (plants) Glycerophospholipid metabolism | details |
| TissueCFM000786 | protein import into mitochondrial outer membrane protein neddylation NEDD8_activating_enzyme_activity acid-amino acid ligase activity mitochondrial outer membrane translocase complex small protein activating enzyme activity Ubiquitin_Proteasome_system, E1: ThiF | details |
| TissueCFM001109 | N-terminal protein amino acid methylation tryptophanyl-tRNA aminoacylation protein neddylation tryptophan-tRNA ligase activity acid-amino acid ligase activity NEDD8_activating_enzyme_activity small protein activating enzyme activity tRNA aminoacylation for protein translation cytoplasm aminoacyl-tRNA ligase activity Ubiquitin_Proteasome_system, E1: ThiF Ubiquitin_Proteasome_system, E3 adaptor: DWD tRNA charging Aminoacyl-tRNA biosynthesis | details |
| TissueCFM001165 | tubulin complex assembly protein neddylation peptidyl-lysine modification to hypusine NEDD8_activating_enzyme_activity acid-amino acid ligase activity tubulin_binding acid phosphatase activity small protein activating enzyme activity unfolded protein binding Ubiquitin_Proteasome_system, E1: ThiF hypusine biosynthesis phosphate acquisition Tuberculosis | details |
| TissueCFM001394 | triglyceride_biosynthetic_process protein neddylation tubulin complex assembly acid-amino acid ligase activity NEDD8_activating_enzyme_activity tubulin_binding protein domain specific binding small protein activating enzyme activity diacylglycerol_O-acyltransferase_activity O-acyltransferase_activity unfolded protein binding Ubiquitin_Proteasome_system, E1: ThiF triacylglycerol biosynthesis Fat digestion and absorption | details |
Expression profiles
 Show details about module gene expression profiling |