TissueCFM000788 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| metal ion binding | 0.003071444 | GO:0046872 |
| nucleic acid binding | 0.004829694 | GO:0003676 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g090850.2 | AT4G36980 (3.00E-126) | |
| Solyc03g119430.2 | RNA recognition motif (RRM)-containing protein | AT3G47120 (1.00E-76) |
| Solyc10g055640.1 | GCIP-interacting family protein | AT2G16860 (2.00E-120) |
| Solyc10g083640.1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | AT5G42820 (3.00E-87) |
| Solyc11g065380.1 | D111/G-patch domain-containing protein | AT3G57910 (9.00E-56) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000268 | spliceosomal complex nuclear mRNA splicing, via spliceosome regulation of signal transduction Transcription_related, Transcription factor: AP2 | details |
| TissueCFM000486 | cell cycle arrest proton-transporting V-type ATPase, V0 domain cyclin-dependent protein kinase inhibitor activity ATP hydrolysis coupled proton transport nucleic acid binding hydrogen ion transmembrane transporter activity Transcription_related, Transcription regulator: C3H | details |
| TissueCFM000845 | GTP binding Transcription_related, Transcription factor: MYB-RELATED | details |
| TissueCFM000929 | regulation of signal transduction microtubule microtubule-based process GTPase activity Nicotinate and nicotinamide metabolism | details |
| TissueCFM001336 | multicellular organismal development ubiquitin-dependent protein catabolic process Transcription_related, Transcription factor: MYB-RELATED Transcription_related, Transcription regulator: HMG EGFR tyrosine kinase inhibitor resistance | details |
Expression profiles
 Show details about module gene expression profiling |