TissueCFM000811 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Ubiquitin_Proteasome_system, DUB: USP | 0.01634065 | gene family |
| Transcription_related, Transcription factor: MYB-RELATED | 0.01634065 | gene family |
| phospholipases | 0.030350293 | plantCyc |
| phosphatidylcholine acyl editing | 0.030350293 | plantCyc |
| triacylglycerol degradation | 0.031194459 | plantCyc |
| Herpes simplex infection | 0.049341029 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g006710.2 | DEA(D/H)-box RNA helicase family protein | AT5G04895 (0) |
| Solyc03g078390.2 | ubiquitin-specific protease 26 | AT3G49600 (0) |
| Solyc06g051570.2 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors | AT5G05660 (0) |
| Solyc09g008100.2 | TSL-kinase interacting protein 1 | AT2G36960 (0) |
| Solyc09g056350.2 | lipase class 3 family protein | AT3G07400 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000525 | poly(A)+ mRNA export from nucleus Ino80_complex myosin complex nuclear pore cellular amino acid metabolic process nucleic acid binding motor activity ATP binding Transcription_related, Transcription regulator: PHD glutamate biosynthesis III Arginine biosynthesis Herpes simplex infection | details |
| TissueCFM000526 | nucleic acid binding helicase activity Herpes simplex infection | details |
| TissueCFM000768 | SUMO_transferase_activity Ubiquitin_Proteasome_system, DUB: USP Epstein-Barr virus infection | details |
| TissueCFM001089 | vesicle_fusion_with_Golgi_apparatus Golgi vesicle transport Golgi membrane protein transporter activity intracellular protein transport Transcription_related, Transcription factor: CAMTA Ubiquitin_Proteasome_system, DUB: USP Epstein-Barr virus infection | details |
| TissueCFM001225 | nucleic acid binding vesicle_fusion_with_Golgi_apparatus Golgi vesicle transport Golgi membrane cellular amino acid metabolic process ubiquitin protein ligase binding protein transporter activity helicase activity Ubiquitin_Proteasome_system, E3 adaptor: Cullin glutamate biosynthesis III Arginine biosynthesis Herpes simplex infection | details |
Expression profiles
 Show details about module gene expression profiling |