TissueCFM000834 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| DNA ligase (ATP) activity | 0.003166561 | GO:0003910 |
| DNA recombination | 0.015516316 | GO:0006310 |
| DNA repair | 0.031052608 | GO:0006281 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000276226 | gene family |
| Non-homologous end-joining | 0.001007368 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g088670.1 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G01110 (2.00E-75) |
| Solyc02g021280.1 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT2G02150 (0) |
| Solyc03g098420.2 | Pentatricopeptide repeat (PPR) superfamily protein | AT3G02010 (0) |
| Solyc11g039870.1 | Protein of unknown function (DUF3414) | AT4G38760 (0) |
| Solyc11g066370.1 | DNA ligase 1 | AT1G08130 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001207 | nucleus protein ADP-ribosylation cell cycle NAD+ ADP-ribosyltransferase activity DNA repair Longevity regulating pathway - worm | details |
Expression profiles
 Show details about module gene expression profiling |