TissueCFM000840 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| trehalose biosynthetic process | 3.47798E-06 | GO:0005992 |
| catalytic activity | 0.001344694 | GO:0003824 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 1.09E-06 | gene family |
| trehalose biosynthesis I | 7.20E-06 | plantCyc |
| Starch and sucrose metabolism | 0.000453597 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g083000.2 | ||
| Solyc04g025940.2 | trehalose-phosphatase/synthase 9 | AT1G23870 (0) |
| Solyc05g005750.2 | trehalose-phosphatase/synthase 9 | AT1G60140 (0) |
| Solyc07g041660.2 | DENN (AEX-3) domain-containing protein | AT5G35560 (0) |
| Solyc08g077470.2 | Reticulon family protein | AT1G78895 (1.00E-54) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000607 | trehalose biosynthetic process catalytic activity metabolic process transferase activity, transferring acyl groups formation of glycosidic bonds, GlycosylTransferases: GTnc leucine degradation I trehalose biosynthesis I isoleucine degradation I 2-oxoisovalerate decarboxylation to isobutanoyl-CoA leucine biosynthesis valine degradation I Starch and sucrose metabolism Pantothenate and CoA biosynthesis Valine, leucine and isoleucine degradation Lysosome hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TissueCFM000641 | Transcription_related, Transcription factor: EIL | details |
| TissueCFM000763 | autophagy two-component sensor activity lipid binding two-component signal transduction system (phosphorelay) signal transduction Transcription_related, Transcription regulator: Orphans Ubiquitin_Proteasome_system, E3 adaptor: DWD Cationic antimicrobial peptide (CAMP) resistance | details |
| TissueCFM000893 | two-component signal transduction system (phosphorelay) protein binding Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription regulator: Orphans | details |
| TissueCFM001324 | trehalose biosynthetic process catalytic activity formation of glycosidic bonds, GlycosylTransferases: GTnc trehalose biosynthesis I Starch and sucrose metabolism | details |
Expression profiles
 Show details about module gene expression profiling |