TissueCFM001006 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| vacuolar transport | 0.023007995 | GO:0007034 |
| Ubiquitin_Proteasome_system, E3: U-box | 0.011005753 | gene family |
| Ascorbate and aldarate metabolism | 0.009292789 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g095150.2 | Late embryogenesis abundant protein | AT2G46140 (7.00E-50) |
| Solyc01g098800.2 | cation exchanger 11 | AT1G08960 (3.00E-176) |
| Solyc02g090360.2 | SKU5 similar 17 | AT5G66920 (0) |
| Solyc03g121360.1 | vacuolar protein sorting 46.1 | AT1G17730 (6.00E-95) |
| Solyc06g076040.2 | plant U-box 13 | AT3G46510 (0) |
| Solyc12g099500.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000229 | Transcription_related, Transcription factor: C2C2-YABBY Cytochrome_P450, Cytochrome P450: CYP75B leucodelphinidin biosynthesis leucopelargonidin and leucocyanidin biosynthesis pinobanksin biosynthesis syringetin biosynthesis flavonol biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis Circadian rhythm - plant Flavonoid biosynthesis Phenylpropanoid biosynthesis hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TissueCFM001005 | phosphatidylinositol phosphorylation protein ubiquitination ubiquitin-protein ligase activity Ubiquitin_Proteasome_system, E3: U-box Phosphatidylinositol signaling system | details |
Expression profiles
 Show details about module gene expression profiling |