TissueCFM001217 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| inositol trisphosphate metabolic process | 0.004661467 | GO:0032957 |
| inositol tetrakisphosphate 1-kinase activity | 0.00761373 | GO:0047325 |
| inositol-1,3,4-trisphosphate_6-kinase_activity | 0.00761373 | GO:0052725 |
| inositol-1,3,4-trisphosphate_5-kinase_activity | 0.00761373 | GO:0052726 |
| Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box | 0.010350618 | gene family |
| Ubiquitin_Proteasome_system, E3 adaptor: BTB | 0.014967406 | gene family |
| 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) | 0.009355763 | plantCyc |
| 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) | 0.009355763 | plantCyc |
| lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) | 0.009355763 | plantCyc |
| fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) | 0.009355763 | plantCyc |
| leucine biosynthesis | 0.009450843 | plantCyc |
| Valine, leucine and isoleucine biosynthesis | 0.008799925 | KEGG |
| Phosphatidylinositol signaling system | 0.022660198 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc04g077120.2 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein | AT4G08170 (9.00E-121) |
| Solyc05g018390.2 | Fibronectin type III domain-containing protein | AT3G24440 (3.00E-143) |
| Solyc05g024240.2 | delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 | AT5G43280 (3.00E-86) |
| Solyc06g060790.1 | Aconitase/3-isopropylmalate dehydratase protein | AT2G43090 (3.00E-75) |
| Solyc07g049580.2 | Ypt/Rab-GAP domain of gyp1p superfamily protein | AT3G07890 (0) |
| Solyc09g072980.2 | BTB-POZ and MATH domain 2 | AT3G06190 (3.00E-171) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000307 | cell cycle fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) | details |
| TissueCFM000705 | imidazoleglycerol-phosphate dehydratase activity histidine biosynthetic process multicellular organismal development ubiquitin-dependent protein catabolic process Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box Ubiquitin_Proteasome_system, E3 adaptor: BTB histidine biosynthesis Histidine metabolism Longevity regulating pathway - worm | details |
| TissueCFM000961 | cell cycle Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase leucine biosynthesis TCA cycle II (plants and fungi) fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) TCA cycle variation V (plant) glutamine biosynthesis III Citrate cycle (TCA cycle) Valine, leucine and isoleucine biosynthesis | details |
| TissueCFM001218 | intracellular inositol trisphosphate metabolic process inositol-1,3,4-trisphosphate_5-kinase_activity inositol tetrakisphosphate 1-kinase activity inositol-1,3,4-trisphosphate_6-kinase_activity Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box Ubiquitin_Proteasome_system, E3 adaptor: BTB 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) Phosphatidylinositol signaling system Non-alcoholic fatty liver disease (NAFLD) | details |
| TissueCFM001294 | serine-type carboxypeptidase activity Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box Ubiquitin_Proteasome_system, E3 adaptor: BTB Renin-angiotensin system | details |
| TissueCFM001424 | protein kinase activity protein phosphorylation transferase activity, transferring acyl groups endoplasmic reticulum small GTPase mediated signal transduction Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) CDP-diacylglycerol biosynthesis I triacylglycerol biosynthesis Cell cycle - yeast Fat digestion and absorption | details |
| TissueCFM001460 | small GTPase mediated signal transduction fatty acid biosynthetic process fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) sphingolipid biosynthesis (plants) | details |
| TissueCFM001490 | imidazoleglycerol-phosphate dehydratase activity histidine biosynthetic process glycerol ether metabolic process fatty acid biosynthetic process Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box Ubiquitin_Proteasome_system, E3 adaptor: BTB histidine biosynthesis sphingolipid biosynthesis (plants) Histidine metabolism Ascorbate and aldarate metabolism | details |
| TissueCFM001496 | Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3_box Ubiquitin_Proteasome_system, E3 adaptor: BTB sphingolipid biosynthesis (plants) | details |
Expression profiles
 Show details about module gene expression profiling |