TissueCFM001437 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| thylakoid membrane | 0.003957973 | GO:0042651 |
| oxygen evolving complex | 0.009488748 | GO:0009654 |
| photosystem II | 0.009745026 | GO:0009523 |
| Photosynthesis | 0.015167711 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g067500.2 | tonneau 2 (TON2) | AT5G18580 (0) |
| Solyc02g064550.2 | Thioredoxin superfamily protein | AT5G65840 (5.00E-88) |
| Solyc03g115020.2 | Protein of unknown function (DUF1118) | AT5G08050 (2.00E-32) |
| Solyc05g006740.2 | Glutathione S-transferase family protein | AT1G10370 (2.00E-64) |
| Solyc07g066310.2 | photosystem II subunit R | AT1G79040 (2.00E-51) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000471 | Transcription_related, Transcription factor: LIM | details |
| TissueCFM001187 | barbed-end_actin_filament_capping F-actin capping protein complex thylakoid membrane oxygen evolving complex photosystem II Photosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |