TissueCFM001500 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| membrane coat | 0.008197188 | GO:0030117 |
| structural molecule activity | 0.021572789 | GO:0005198 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.030712622 | gene family |
| Protein processing in endoplasmic reticulum | 0.004741916 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g090970.2 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | AT4G00165 (6.00E-32) |
| Solyc03g120270.2 | Coatomer, beta\' subunit | AT1G52360 (0) |
| Solyc06g065840.2 | TRS120 | AT5G11040 (0) |
| Solyc09g007300.1 | SITE-1 protease | AT5G19660 (0) |
| Solyc10g054820.1 | plasma membrane intrinsic protein 1;4 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000814 | tetrahydrofolate_biosynthetic_process GTP_cyclohydrolase_I_activity magnesium_ion_transport magnesium_ion_transmembrane_transporter_activity Transcription_related, Transcription regulator: LUG 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II Folate biosynthesis | details |
| TissueCFM001045 | membrane acetylglucosaminyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc volatile benzenoid biosynthesis I (ester formation) | details |
| TissueCFM001209 | acetylglucosaminyltransferase activity transferase activity, transferring acyl groups protein glycosylation formation of glycosidic bonds, GlycosylTransferases: GTnc pyruvate decarboxylation to acetyl CoA Pyruvate metabolism Protein processing in endoplasmic reticulum Various types of N-glycan biosynthesis | details |
| TissueCFM001210 | protein glycosylation acetylglucosaminyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: C3H volatile benzenoid biosynthesis I (ester formation) Various types of N-glycan biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |