TreatCFM000029 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| origin recognition complex | 0.001727215 | GO:0000808 |
| double-strand break repair via homologous recombination | 0.009858384 | GO:0000724 |
| peptidyl-prolyl cis-trans isomerase activity | 0.017666273 | GO:0003755 |
| protein_peptidyl-prolyl_isomerization | 0.025135682 | GO:0000413 |
| DNA replication | 0.025135682 | GO:0006260 |
| protein folding | 0.042885239 | GO:0006457 |
| DNA repair | 0.04726897 | GO:0006281 |
| Cationic antimicrobial peptide (CAMP) resistance | 0.014171782 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g094760.2 | origin recognition complex protein 5 | AT4G29910 (6.00E-161) |
| Solyc01g108340.2 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase | AT2G15790 (2.00E-144) |
| Solyc02g050210.1 | BRCA2-like B | AT5G01630 (7.00E-98) |
| Solyc04g054180.2 | AT5G10010 (2.00E-120) | |
| Solyc06g008840.2 | BRCT domain-containing DNA repair protein | AT3G21480 (1.00E-65) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000281 | DNA replication nucleus origin recognition complex Cationic antimicrobial peptide (CAMP) resistance Retinol metabolism MicroRNAs in cancer Viral carcinogenesis | details |
| TreatCFM000634 | Smc5-Smc6_complex origin recognition complex protein methylation DNA replication | details |
| TreatCFM001339 | origin recognition complex transcription coactivator activity nuclease activity DNA replication Transcription_related, Transcription regulator: Coactivator p15 | details |
Expression profiles
 Show details about module gene expression profiling |