TreatCFM000040 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g006770.1 | Protein of unknown function (DUF604) | AT5G12460 (1.00E-103) |
| Solyc01g066400.1 | pectin methylesterase 61 | |
| Solyc01g090000.1 | BAX inhibitor 1 | AT5G47120 (2.00E-28) |
| Solyc01g108090.1 | Protein of unknown function (DUF1685) | |
| Solyc02g032830.1 | Peroxidase superfamily protein | AT4G21960 (2.00E-94) |
| Solyc02g079910.1 | terpene synthase 10 | |
| Solyc04g005000.1 | ||
| Solyc05g008740.1 | RNA-dependent RNA polymerase 6 | |
| Solyc05g017720.1 | ||
| Solyc05g046350.1 | tryptophan synthase beta-subunit 1 | |
| Solyc05g052430.1 | TRICHOME BIREFRINGENCE-LIKE 33 | AT2G40320 (8.00E-146) |
| Solyc05g052770.1 | Phosphotyrosine protein phosphatases superfamily protein | |
| Solyc06g011330.1 | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases | AT3G53180 (1.00E-76) |
| Solyc06g064580.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | |
| Solyc06g071940.1 | HXXXD-type acyl-transferase family protein | |
| Solyc06g072180.1 | Plant Tudor-like protein | |
| Solyc07g009250.1 | MuDR family transposase | |
| Solyc07g041570.1 | ||
| Solyc07g063280.1 | GTP-binding family protein | AT1G52980 (7.00E-29) |
| Solyc08g005080.1 | ubiquitin-specific protease 20 | AT4G17895 (3.00E-73) |
| Solyc08g062390.1 | ||
| Solyc08g062480.1 | ||
| Solyc08g067080.1 | ammonium transporter 2 | AT2G38290 (8.00E-152) |
| Solyc09g014330.1 | MuDR family transposase | |
| Solyc09g059910.1 | Protein of unknown function (DUF1423) | AT1G05410 (3.00E-30) |
| Solyc09g065060.1 | MuDR family transposase | |
| Solyc09g091330.1 | Plant self-incompatibility protein S1 family | |
| Solyc10g037990.1 | ||
| Solyc10g049330.1 | ||
| Solyc10g054270.1 | ||
| Solyc10g055510.1 | MuDR family transposase | AT1G64260 (2.00E-26) |
| Solyc10g062110.1 | Major facilitator superfamily protein | AT3G05150 (7.00E-31) |
| Solyc10g062140.1 | ||
| Solyc11g008240.1 | SKP1-like 11 | AT4G34210 (9.00E-29) |
| Solyc11g012500.1 | ||
| Solyc11g050780.1 | ||
| Solyc11g066180.1 | response regulator 14 | |
| Solyc11g066190.1 | response regulator 14 | |
| Solyc11g071860.1 | ||
| Solyc11g072210.1 | C2H2-like zinc finger protein | |
| Solyc12g011210.1 | ||
| Solyc12g013940.1 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain | AT4G32551 (9.00E-69) |
| Solyc12g098140.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000028 | CCR4-NOT complex mRNA_catabolic_process cell wall cell wall modification pectinesterase activity copper ion binding Transcription_related, Transcription regulator: Rcd1-like hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Ascorbate and aldarate metabolism Pentose and glucuronate interconversions | details |
| TreatCFM000062 | cell wall biogenesis galactoside 2-alpha-L-fucosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc formation of glycosidic bonds, GlycosylTransferases: GTnc Glycosphingolipid biosynthesis - globo and isoglobo series Glycosaminoglycan biosynthesis - heparan sulfate / heparin Asthma | details |
| TreatCFM000124 | ammonium_transport ammonium_transmembrane_transport nitrogen compound metabolic process ammonium transmembrane transporter activity glutamate-ammonia ligase activity ammonia assimilation cycle II glutamine biosynthesis I nitrate reduction II (assimilatory) ammonia assimilation cycle I ornithine-citrulline shuttle glutamine biosynthesis III GABAergic synapse | details |
| TreatCFM000329 | protein depalmitoylation | details |
Expression profiles
 Show details about module gene expression profiling |