TreatCFM000107 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription_related, Transcription factor: C2C2-GATA | 0.001159525 | gene family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.029527813 | gene family |
| Transcription_related, Transcription factor: zf-HD | 0.034737667 | gene family |
| Diterpenoid biosynthesis | 0.026463844 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g058030.1 | gibberellin 2-oxidase 6 | AT1G47990 (2.00E-50) |
| Solyc01g100220.2 | GATA transcription factor 17 | |
| Solyc02g080860.1 | Homeodomain-like superfamily protein | AT2G02060 (8.00E-28) |
| Solyc04g014260.1 | homeobox protein 22 | AT4G24660 (5.00E-52) |
| Solyc04g071060.1 | ||
| Solyc04g078010.2 | Glycosyl hydrolase family 35 protein | |
| Solyc04g079800.2 | F-box/RNI-like/FBD-like domains-containing protein | |
| Solyc06g076310.1 | ||
| Solyc07g049630.1 | ||
| Solyc08g075930.2 | ||
| Solyc08g077860.2 | subtilisin-like serine protease 3 | AT2G19170 (0) |
| Solyc09g011190.1 | ||
| Solyc09g091810.1 | ||
| Solyc10g007230.1 | tetratricopetide-repeat thioredoxin-like 3 | AT3G58620 (1.00E-128) |
| Solyc10g008040.2 | late embryogenesis abundant domain-containing protein / LEA domain-containing protein | |
| Solyc11g006790.1 | ||
| Solyc11g070010.1 | Dynamin related protein 4C | AT1G60500 (8.00E-30) |
| Solyc12g042500.1 | Gibberellin-regulated family protein | |
| Solyc12g099370.1 | GATA transcription factor 16 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000437 | pyrimidine nucleotide biosynthetic process glutamine metabolic process CTP synthase activity Transcription_related, Transcription factor: zf-HD Transcription_related, Transcription factor: C2C2-GATA UTP and CTP de novo biosynthesis glutamine degradation I UTP and CTP dephosphorylation II triacylglycerol degradation UTP and CTP dephosphorylation I pyrimidine ribonucleotides interconversion Pyrimidine metabolism Vitamin digestion and absorption | details |
Expression profiles
 Show details about module gene expression profiling |