TreatCFM000272 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| mitosis | 0.009493805 | GO:0007067 |
| phospholipid transport | 0.014218591 | GO:0015914 |
| nucleosome assembly | 0.016297592 | GO:0006334 |
| chromosome, centromeric region | 0.016779805 | GO:0000775 |
| nucleus | 0.035638556 | GO:0005634 |
| nucleosome | 0.040519468 | GO:0000786 |
| Transcription_related, Transcription factor: MYB-RELATED | 0.032500973 | gene family |
| Protein processing in endoplasmic reticulum | 0.028382003 | KEGG |
| hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | 0.002590226 | gene famuly |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc00g140060.2 | tripeptidyl peptidase ii | AT4G20850 (1.00E-69) |
| Solyc01g011090.2 | aminophospholipid ATPase 3 | AT1G59820 (2.00E-82) |
| Solyc01g057850.2 | zinc knuckle (CCHC-type) family protein | AT5G49930 (0) |
| Solyc01g079700.2 | Homeotic gene regulator | |
| Solyc04g026270.2 | AT1G60995 (5.00E-50) | |
| Solyc05g015250.2 | glucosidase 1 | |
| Solyc05g043340.2 | centromere/kinetochore protein, putative (ZW10) | AT2G32900 (5.00E-35) |
| Solyc07g005800.2 | multipolar spindle 1 | AT5G57880 (2.00E-31) |
| Solyc07g017740.2 | Galactose oxidase/kelch repeat superfamily protein | |
| Solyc07g040920.2 | Homeodomain-like/winged-helix DNA-binding family protein | AT1G17520 (4.00E-40) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000070 | 4-alpha-glucanotransferase activity ternatin C3 biosynthesis starch degradation II Retrograde endocannabinoid signaling hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000098 | anaphase-promoting complex Transcription_related, Transcription factor: MYB-RELATED Jak-STAT signaling pathway | details |
| TreatCFM000142 | arginine degradation VI (arginase 2 pathway) arginine degradation I (arginase pathway) proline biosynthesis III L-Nδ-acetylornithine biosynthesis hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000218 | serine-type carboxypeptidase activity ternatin C3 biosynthesis | details |
| TreatCFM000361 | details | |
| TreatCFM000660 | mitochondrion nucleosome double-stranded DNA binding unfolded protein binding nucleosome assembly protein folding Transcription_related, Transcription factor: mTERF Transcription_related, Transcription factor: MYB-RELATED Non-alcoholic fatty liver disease (NAFLD) | details |
Expression profiles
 Show details about module gene expression profiling |