TreatCFM000373 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ribosome biogenesis | 0.002157652 | GO:0042254 |
| mitochondrion | 0.006748195 | GO:0005739 |
| cytochrome-c oxidase activity | 0.019696341 | GO:0004129 |
| protein domain specific binding | 0.019696341 | GO:0019904 |
| calcium ion binding | 0.045799608 | GO:0005509 |
| aerobic respiration I (cytochrome c) | 0.024236087 | plantCyc |
| Non-alcoholic fatty liver disease (NAFLD) | 0.021409426 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g103220.2 | cytochrome c-2 | AT4G10040 (1.00E-56) |
| Solyc03g083520.2 | Calcium-binding EF-hand family protein | AT1G12310 (2.00E-70) |
| Solyc04g012120.2 | general regulatory factor 2 | AT1G78300 (6.00E-129) |
| Solyc04g074550.2 | cytochrome C oxidase 6B | AT1G22450 (4.00E-42) |
| Solyc10g078660.1 | Ribosomal protein L24e family protein | AT2G44860 (9.00E-64) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001311 | proton-transporting two-sector ATPase complex, catalytic domain tRNA aminoacylation for protein translation ATP hydrolysis coupled proton transport Ubiquitin_Proteasome_system, DUB: JAMM tRNA charging adenosine ribonucleotides de novo biosynthesis triacylglycerol degradation | details |
Expression profiles
 Show details about module gene expression profiling |