TreatCFM000460 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| tRNA methylation | 0.001813471 | GO:0030488 |
| tRNA_(m1A)_methyltransferase_complex | 0.003324698 | GO:0031515 |
| chaperone binding | 0.019922359 | GO:0051087 |
| Peroxisome | 0.015615302 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g083970.2 | BCL-2-associated athanogene 7 | AT5G62390 (1.00E-70) |
| Solyc04g079310.2 | RNA-binding protein 47C | AT1G47490 (1.00E-109) |
| Solyc04g081360.2 | eukaryotic initiation factor 3 gamma subunit family protein | AT2G45730 (4.00E-147) |
| Solyc06g062760.2 | Ribosomal protein L34 | AT3G13882 (1.00E-35) |
| Solyc06g063130.2 | AT1G53760 (2.00E-87) | |
| Solyc06g068400.2 | Ribosomal protein L30/L7 family protein | AT2G01250 (1.00E-66) |
| Solyc12g009860.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000555 | heterotrimeric G-protein complex methionine metabolic process stearate biosynthesis II (bacteria and plants) fatty acid elongation -- saturated cis-vaccenate biosynthesis octanoyl-ACP biosynthesis (mitochondria, yeast) palmitate biosynthesis II (bacteria and plants) fatty acid biosynthesis initiation I adenine and adenosine salvage II Biotin metabolism | details |
| TreatCFM000725 | GMP synthase (glutamine-hydrolyzing) activity GMP biosynthetic process purine nucleotide biosynthetic process glutamine metabolic process RNA processing guanosine ribonucleotides de novo biosynthesis glutamine degradation I Drug metabolism - other enzymes | details |
| TreatCFM001007 | G-protein coupled receptor signaling pathway heterotrimeric G-protein complex signal transducer activity Transcription_related, Transcription factor: B3 | details |
| TreatCFM001109 | protein methylation SOS_response single-stranded DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |