TreatCFM000491 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| exocyst | 0.005629743 | GO:0000145 |
| vesicle docking involved in exocytosis | 0.007851592 | GO:0006904 |
| Transcription_related, Transcription factor: C2C2-LSD | 0.004432547 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g065540.1 | RING/U-box superfamily protein | AT1G19310 (8.00E-48) |
| Solyc02g069720.2 | LSD1 zinc finger family protein | AT4G20380 (1.00E-37) |
| Solyc02g080170.1 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT4G21170 (1.00E-78) |
| Solyc03g113010.1 | Galactose oxidase/kelch repeat superfamily protein | AT2G02870 (1.00E-141) |
| Solyc08g078280.1 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G47360 (1.00E-76) |
| Solyc10g079170.1 | Leucine-rich repeat protein kinase family protein | AT2G41820 (0) |
| Solyc12g096290.1 | exocyst complex component sec15A | AT3G56640 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000362 | ligase activity Transcription_related, Transcription factor: C2C2-LSD Transcription_related, Transcription regulator: ARF Peptidoglycan biosynthesis | details |
| TreatCFM001117 | Cytochrome_P450, Cytochrome P450: CYP86A Transcription_related, Transcription factor: C2C2-LSD formation of glycosidic bonds, GlycosylTransferases: GTnc suberin monomers biosynthesis 4-hydroxybenzoate biosynthesis I (eukaryotes) simplecoumarins biosynthesis umbelliferone biosynthesis Phenylpropanoid biosynthesis Phenylpropanoid biosynthesis Flavonoid biosynthesis | details |
| TreatCFM001164 | Transcription_related, Transcription factor: C2C2-LSD | details |
| TreatCFM001209 | exocyst vesicle docking involved in exocytosis nucleobase-containing compound metabolic process nucleobase-containing compound kinase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD adenosine ribonucleotides de novo biosynthesis Ribosome biogenesis in eukaryotes | details |
Expression profiles
 Show details about module gene expression profiling |