TreatCFM000545 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| superpathway of hyoscyamine and scopolamine biosynthesis | 0.016769177 | plantCyc |
| hyoscyamine and scopolamine biosynthesis | 0.016769177 | plantCyc |
| volatile benzenoid biosynthesis I (ester formation) | 0.022322879 | plantCyc |
| homogalacturonan degradation | 0.022398014 | plantCyc |
| Peroxisome | 0.030742682 | KEGG |
| Tropane, piperidine and pyridine alkaloid biosynthesis | 0.030023487 | KEGG |
| Pentose and glucuronate interconversions | 0.042879422 | KEGG |
| hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | 0.008036236 | gene famuly |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g103650.2 | alpha/beta-Hydrolases superfamily protein | AT1G34340 (9.00E-145) |
| Solyc04g054950.2 | NAD(P)-binding Rossmann-fold superfamily protein | AT5G06060 (3.00E-83) |
| Solyc06g082020.2 | ||
| Solyc07g041650.1 | Pectin lyase-like superfamily protein | AT1G17150 (5.00E-90) |
| Solyc11g007030.1 | alpha/beta-Hydrolases superfamily protein | AT2G36290 (2.00E-112) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001469 | GTP cyclohydrolase II activity 3,4-dihydroxy-2-butanone-4-phosphate synthase activity riboflavin biosynthetic process Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) flavin biosynthesis I (bacteria and plants) Peroxisome Riboflavin metabolism Quorum sensing | details |
Expression profiles
 Show details about module gene expression profiling |