TreatCFM000656 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| transcription factor TFIIA complex | 0.002331338 | GO:0005672 |
| endoplasmic reticulum membrane | 0.012006478 | GO:0005789 |
| transcription initiation from RNA polymerase II promoter | 0.012813501 | GO:0006367 |
| response to wounding | 0.018472201 | GO:0009611 |
| ornithine biosynthesis | 0.002846789 | plantCyc |
| Arginine biosynthesis | 0.006717164 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc06g068130.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G20190 (1.00E-34) |
| Solyc06g076390.2 | Transcription factor IIA, alpha/beta subunit | AT1G07470 (5.00E-97) |
| Solyc07g007250.2 | ||
| Solyc08g076970.2 | Peptidase M20/M25/M40 family protein | AT4G17830 (1.00E-175) |
| Solyc09g084450.2 | Serine protease inhibitor, potato inhibitor I-type family protein | |
| Solyc10g009370.2 | MuDR family transposase | AT1G64260 (1.00E-38) |
| Solyc10g049540.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | |
| Solyc10g054880.1 | Translocon-associated protein (TRAP), alpha subunit | AT2G16595 (4.00E-66) |
| Solyc10g083370.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000002 | cytochrome-c oxidase activity aerobic respiration I (cytochrome c) NAD/NADH phosphorylation and dephosphorylation aerobic respiration III (alternative oxidase pathway) Non-alcoholic fatty liver disease (NAFLD) | details |
| TreatCFM000070 | 4-alpha-glucanotransferase activity ternatin C3 biosynthesis starch degradation II Retrograde endocannabinoid signaling hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000131 | endoplasmic reticulum membrane | details |
| TreatCFM000133 | endoplasmic reticulum membrane hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| TreatCFM000292 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor Transcription_related, Transcription regulator: AUX/IAA phosphate acquisition Retrograde endocannabinoid signaling Tuberculosis | details |
| TreatCFM000828 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor Transcription_related, Transcription regulator: AUX/IAA Retrograde endocannabinoid signaling | details |
Expression profiles
 Show details about module gene expression profiling |