TreatCFM000793 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nuclear pore | 0.002933308 | GO:0005643 |
| ribonucleoside_binding | 0.033488603 | GO:0032549 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g084650.2 | ||
| Solyc03g110880.2 | nuclear RNA polymerase D2A | AT3G23780 (0) |
| Solyc04g016240.2 | Nucleoporin interacting component (Nup93/Nic96-like) family protein | AT2G41620 (0) |
| Solyc04g077060.2 | RNA-binding KH domain-containing protein | AT1G51580 (6.00E-39) |
| Solyc07g049480.2 | cleavage and polyadenylation specificity factor 73-I | AT1G61010 (0) |
| Solyc12g062290.1 | DegP protease 9 | AT5G40200 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000515 | Glutathione metabolism | details |
| TreatCFM000554 | sugar:hydrogen symporter activity carbohydrate transport Golgi membrane formation of glycosidic bonds, GlycosylTransferases: GTnc Glycosphingolipid biosynthesis - lacto and neolacto series hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000901 | molybdate_ion_transport molybdate_ion_transmembrane_transporter_activity formation of glycosidic bonds, GlycosylTransferases: GTnc Glycosphingolipid biosynthesis - lacto and neolacto series hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001519 | 'de novo' pyrimidine base biosynthetic process orotidine-5'-phosphate decarboxylase activity nucleoside metabolic process nucleobase-containing compound kinase activity nucleobase-containing compound metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc UMP biosynthesis adenosine ribonucleotides de novo biosynthesis Other types of O-glycan biosynthesis Ribosome biogenesis in eukaryotes Drug metabolism - other enzymes | details |
Expression profiles
 Show details about module gene expression profiling |