TreatCFM000938 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| mitochondrial matrix | 0.004229972 | GO:0005759 |
| single-stranded DNA binding | 0.017711823 | GO:0003697 |
| rRNA binding | 0.021543452 | GO:0019843 |
| DNA replication | 0.027703497 | GO:0006260 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g005280.1 | Pentatricopeptide repeat (PPR) superfamily protein | AT1G50270 (5.00E-151) |
| Solyc02g084730.2 | Ribosomal RNA adenine dimethylase family protein | AT5G66360 (2.00E-105) |
| Solyc02g087610.1 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G28660 (2.00E-150) |
| Solyc05g054990.2 | Translation elongation factor EF1B/ribosomal protein S6 family protein | AT3G18760 (2.00E-43) |
| Solyc06g065800.2 | Mitochondrial glycoprotein family protein | AT4G31930 (1.00E-64) |
| Solyc09g007430.1 | plastid transcriptionally active 9 | AT4G20010 (3.00E-68) |
| Solyc11g006940.1 | Pentatricopeptide repeat (PPR-like) superfamily protein | AT5G37570 (1.00E-171) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000517 | callose biosynthesis MAPK signaling pathway - yeast | details |
| TreatCFM000774 | rRNA binding DNA-directed RNA polymerase activity Epstein-Barr virus infection | details |
Expression profiles
 Show details about module gene expression profiling |