TreatCFM001037 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nucleosome assembly | 0.01336512 | GO:0006334 |
| nucleosome | 0.021962469 | GO:0000786 |
| lyase activity | 0.025395859 | GO:0016829 |
| Transcription_related, Transcription factor: MYB-RELATED | 0.010893767 | gene family |
| lysine biosynthesis VI | 0.002157652 | plantCyc |
| Monobactam biosynthesis | 0.003019669 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g106940.2 | telomere repeat binding factor 1 | AT1G49950 (2.00E-72) |
| Solyc02g080150.1 | ||
| Solyc03g044660.2 | dihydrodipicolinate synthase | AT2G45440 (1.00E-156) |
| Solyc04g008710.2 | ||
| Solyc04g080190.2 | AT1G45170 (4.00E-82) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000637 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IMP cyclohydrolase activity phosphoribosylaminoimidazolecarboxamide formyltransferase activity asparagine synthase (glutamine-hydrolyzing) activity asparagine biosynthetic process purine nucleotide biosynthetic process pteridine-containing compound metabolic process 5S rRNA binding folic acid-containing compound biosynthetic process mitochondrial outer membrane ribosome translation structural constituent of ribosome Transcription_related, Transcription regulator: SET asparagine biosynthesis II tetrahydrofolate biosynthesis inosine-5'-phosphate biosynthesis II asparagine biosynthesis I 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I superpathway of asparagine biosynthesis stearate biosynthesis II (bacteria and plants) fatty acid elongation -- saturated tetrahydrofolate biosynthesis II cis-vaccenate biosynthesis octanoyl-ACP biosynthesis (mitochondria, yeast) glutamine degradation I Alanine, aspartate and glutamate metabolism Folate biosynthesis Antifolate resistance | details |
| TreatCFM000845 | structural constituent of ribosome translation intracellular ribosome | details |
| TreatCFM001261 | Transcription_related, Transcription factor: trihelix | details |
Expression profiles
 Show details about module gene expression profiling |