TreatCFM001108 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| glycerol-3-phosphate dehydrogenase complex | 0.000719632 | GO:0009331 |
| glycerol-3-phosphate catabolic process | 0.006530656 | GO:0046168 |
| glycerol-3-phosphate metabolic process | 0.006530656 | GO:0006072 |
| regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity | 0.007834982 | GO:0000079 |
| protein_kinase_binding | 0.009518532 | GO:0019901 |
| glycerol-3-phosphate dehydrogenase [NAD+] activity | 0.009518532 | GO:0004367 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.037936247 | GO:0016616 |
| NAD binding | 0.037936247 | GO:0051287 |
| glycerol-3-phosphate shuttle | 0.001151212 | plantCyc |
| MAPK signaling pathway - yeast | 0.007766204 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g067930.2 | NAD-dependent glycerol-3-phosphate dehydrogenase family protein | AT5G40610 (2.00E-172) |
| Solyc05g012130.2 | Protein kinase superfamily protein | AT1G69220 (0) |
| Solyc07g022860.2 | Regulator of Vps4 activity in the MVB pathway protein | |
| Solyc10g055640.1 | GCIP-interacting family protein | AT2G16860 (2.00E-120) |
| Solyc10g078180.1 | Cyclin family protein | AT5G45190 (1.00E-147) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000058 | glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate metabolic process glycerol-3-phosphate catabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity NAD binding oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Transcription_related, Transcription regulator: C3H glycerol-3-phosphate shuttle MAPK signaling pathway - yeast | details |
| TreatCFM000544 | nucleic acid binding glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate metabolic process glycerol-3-phosphate catabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding glycerol-3-phosphate shuttle MAPK signaling pathway - yeast Herpes simplex infection | details |
| TreatCFM000603 | glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate metabolic process glycerol-3-phosphate catabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity isoprenoid biosynthetic process superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) geranylgeranyl diphosphate biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of phylloquinol biosynthesis glycerol-3-phosphate shuttle jasmonic acid biosynthesis Terpenoid backbone biosynthesis Non-small cell lung cancer MAPK signaling pathway - yeast Longevity regulating pathway - worm | details |
| TreatCFM000739 | glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate catabolic process glycerol-3-phosphate metabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding glycerol-3-phosphate shuttle MAPK signaling pathway - yeast | details |
| TreatCFM000789 | chloride transport SUMO_transferase_activity voltage-gated chloride channel activity protein phosphorylation protein kinase activity Protein_kinases_phosphatases, PPC:4.1.1: MAP3K Platinum drug resistance | details |
| TreatCFM000874 | carbohydrate metabolic process glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate catabolic process glycerol-3-phosphate metabolic process magnesium_ion_transport glycerol-3-phosphate dehydrogenase [NAD+] activity magnesium_ion_transmembrane_transporter_activity phosphotransferase activity, alcohol group as acceptor oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding glycerol-3-phosphate shuttle Amino sugar and nucleotide sugar metabolism Pentose and glucuronate interconversions MAPK signaling pathway - yeast hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000897 | four-way junction helicase activity DNA recombination glycerol-3-phosphate dehydrogenase complex F-actin capping protein complex barbed-end_actin_filament_capping glycerol-3-phosphate metabolic process glycerol-3-phosphate catabolic process DNA repair poly(ADP-ribose) glycohydrolase activity glycerol-3-phosphate dehydrogenase [NAD+] activity carbohydrate metabolic process glycerol-3-phosphate shuttle Synaptic vesicle cycle MAPK signaling pathway - yeast | details |
| TreatCFM001067 | intracellular protein transport vesicle-mediated transport | details |
| TreatCFM001200 | outer membrane glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate metabolic process mRNA_3'-end_processing glycerol-3-phosphate catabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity cofactor binding Transcription_related, Transcription regulator: SWI/SNF-BAF60b glycerol-3-phosphate shuttle TCA cycle II (plants and fungi) TCA cycle variation V (plant) MAPK signaling pathway - yeast Carbon fixation pathways in prokaryotes | details |
| TreatCFM001492 | phospholipid transport regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity phospholipid-translocating ATPase activity protein_kinase_binding | details |
| TreatCFM001555 | phospholipid transport regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity phospholipid-translocating ATPase activity protein_kinase_binding Herpes simplex infection | details |
| TreatCFM001558 | glycerol-3-phosphate dehydrogenase complex outer membrane glycerol-3-phosphate catabolic process glycerol-3-phosphate metabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity NAD binding oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Ubiquitin_Proteasome_system, DUB: OTU glycerol-3-phosphate shuttle jasmonic acid biosynthesis MAPK signaling pathway - yeast | details |
Expression profiles
 Show details about module gene expression profiling |