TreatCFM001123 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| gene silencing by RNA | 0.002013924 | GO:0031047 |
| Transcription_related, Transcription regulator: HB | 0.015167711 | gene family |
| EGFR tyrosine kinase inhibitor resistance | 0.044395803 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g058380.2 | eukaryotic translation initiation factor 2 (eIF-2) family protein | AT1G76810 (0) |
| Solyc03g111390.2 | Galactose oxidase/kelch repeat superfamily protein | AT5G50310 (0) |
| Solyc03g114990.2 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | AT4G26190 (2.00E-47) |
| Solyc06g051810.2 | XH/XS domain-containing protein | AT3G48670 (0) |
| Solyc07g008730.1 | pathogenesis related homeodomain protein A | AT4G29940 (2.00E-83) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000354 | Cdc73/Paf1 complex valyl-tRNA aminoacylation histone modification valine-tRNA ligase activity gene silencing by RNA tRNA aminoacylation for protein translation Transcription_related, Transcription regulator: SNF2 tRNA charging | details |
| TreatCFM001122 | gene silencing by RNA kinesin complex microtubule-based movement Transcription_related, Transcription regulator: HB EGFR tyrosine kinase inhibitor resistance | details |
Expression profiles
 Show details about module gene expression profiling |