TreatCFM001138 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| serine-type_exopeptidase_activity | 0.011500786 | GO:0070008 |
| serine-type peptidase activity | 0.018876747 | GO:0008236 |
| ATP binding | 0.048564101 | GO:0005524 |
| serine-type endopeptidase activity | 0.048564101 | GO:0004252 |
| Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family | 0.001727215 | gene family |
| Renin-angiotensin system | 0.006904088 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g008950.2 | calmodulin 5 | AT2G27030 (2.00E-81) |
| Solyc01g080240.2 | mitogen-activated protein kinase 16 | AT5G19010 (0) |
| Solyc07g006540.2 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | AT5G57710 (0) |
| Solyc08g022070.2 | Prolyl oligopeptidase family protein | AT1G76140 (0) |
| Solyc10g080520.1 | zinc ion binding | AT3G54360 (2.00E-132) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000277 | transcription factor complex Transcription_related, Transcription factor: E2F-DP Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase Platinum drug resistance Quorum sensing | details |
| TreatCFM000306 | CCAAT-binding factor complex oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water Transcription_related, Transcription factor: NF-YC glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) glycolysis I (from glucose 6-phosphate) gluconeogenesis I Alzheimer's disease | details |
| TreatCFM000679 | translational initiation translation initiation factor activity transmembrane_transporter_activity formation of glycosidic bonds, GlycosylTransferases: GTnc xyloglucan biosynthesis | details |
| TreatCFM000816 | 7-methylguanosine mRNA capping RNA modification protein insertion into membrane pseudouridine synthesis mRNA processing mRNA guanylyltransferase activity serine-type_exopeptidase_activity protein tyrosine/serine/threonine phosphatase activity serine-type peptidase activity pseudouridine synthase activity Transcription_related, Transcription regulator: PHD mRNA surveillance pathway Renin-angiotensin system | details |
| TreatCFM000941 | transferase activity, transferring pentosyl groups nicotinate-nucleotide diphosphorylase (carboxylating) activity NAD biosynthetic process Ubiquitin_Proteasome_system, DUB: OTU nicotine biosynthesis superpathway of nicotine biosynthesis NAD biosynthesis I (from aspartate) Nicotinate and nicotinamide metabolism | details |
| TreatCFM000942 | CCAAT-binding factor complex trehalose biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: NF-YC trehalose biosynthesis I Starch and sucrose metabolism | details |
| TreatCFM001067 | intracellular protein transport vesicle-mediated transport | details |
| TreatCFM001168 | integral_component_of_endoplasmic_reticulum_membrane spindle pole cytoskeleton microtubule organizing center macromolecule biosynthetic process microtubule_nucleation | details |
| TreatCFM001303 | lipid glycosylation metabolic process Transcription_related, Transcription factor: LIM indole-3-acetate activation I | details |
| TreatCFM001580 | protein dephosphorylation protein serine/threonine phosphatase activity catalytic activity cell redox homeostasis threonine biosynthesis from homoserine methionine biosynthesis II Oxidative phosphorylation Glycine, serine and threonine metabolism EGFR tyrosine kinase inhibitor resistance | details |
Expression profiles
 Show details about module gene expression profiling |