TreatCFM001148 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nucleotide biosynthetic process | 0.002158895 | GO:0009165 |
| ribose phosphate diphosphokinase activity | 0.006573013 | GO:0004749 |
| nuclease activity | 0.0139572 | GO:0004518 |
| peptidase activity | 0.016407947 | GO:0008233 |
| Transcription_related, Transcription factor: TUB | 0.005179259 | gene family |
| PRPP biosynthesis I | 0.001151212 | plantCyc |
| Purine metabolism | 0.010981234 | KEGG |
| Antigen processing and presentation | 0.009920626 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g067670.2 | ||
| Solyc01g067680.2 | tubby like protein 3 | AT2G47900 (7.00E-78) |
| Solyc10g024410.1 | Phosphoribosyltransferase family protein | AT2G44530 (2.00E-159) |
| Solyc12g089220.1 | bifunctional nuclease in basal defense response 1 | AT1G75380 (1.00E-87) |
| Solyc12g095910.1 | gamma vacuolar processing enzyme | AT4G32940 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000241 | glycopeptide_alpha-N-acetylgalactosaminidase_activity peptidase activity Cytochrome_P450, Cytochrome P450: CYP77B formation of glycosidic bonds, GlycosylTransferases: GTnc poly-hydroxy fatty acids biosynthesis Antigen processing and presentation hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001124 | methionine metabolic process methylenetetrahydrofolate reductase (NADPH) activity peptidase activity N-acetyltransferase_activity Transcription_related, Transcription factor: TUB Transcription_related, Transcription regulator: GNAT folate transformations II Antigen processing and presentation Antifolate resistance | details |
| TreatCFM001343 | Transcription_related, Transcription regulator: MBF1 hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001379 | peptidase activity fatty acid elongation -- saturated cis-vaccenate biosynthesis stearate biosynthesis II (bacteria and plants) palmitate biosynthesis II (bacteria and plants) Biotin metabolism Antigen processing and presentation | details |
| TreatCFM001442 | peptidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Antigen processing and presentation | details |
Expression profiles
 Show details about module gene expression profiling |