TreatCFM001185 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| GTP binding | 0.002332337 | GO:0005525 |
| protein insertion into membrane | 0.006041251 | GO:0051205 |
| Ubiquitin_Proteasome_system, DUB: USP | 0.027103587 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc06g069020.2 | Translation elongation factor EF1A/initiation factor IF2gamma family protein | AT1G18070 (0) |
| Solyc06g083730.2 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | AT5G43960 (8.00E-73) |
| Solyc07g063650.2 | ubiquitin-specific protease 14 | AT3G20630 (0) |
| Solyc08g082290.2 | homolog of yeast oxidase assembly 1 (OXA1) | AT5G62050 (1.00E-44) |
| Solyc09g073000.2 | GTP binding Elongation factor Tu family protein | AT4G02930 (0) |
| Solyc10g085580.1 | embryo sac development arrest 7 | AT3G56990 (0) |
| Solyc12g008630.1 | Insulinase (Peptidase family M16) protein | AT1G51980 (8.00E-177) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001027 | U1_snRNP spliceosomal_snRNP_assembly protein insertion into membrane mediator complex regulation of transcription from RNA polymerase II promoter nuclear mRNA splicing, via spliceosome RNA_polymerase_II_transcription_cofactor_activity Transcription_related, Transcription regulator: MED7 Transcription_related, Transcription regulator: SWI/SNF-BAF60b RNA transport | details |
| TreatCFM001091 | protein insertion into membrane protein folding unfolded protein binding | details |
| TreatCFM001200 | outer membrane glycerol-3-phosphate dehydrogenase complex glycerol-3-phosphate metabolic process mRNA_3'-end_processing glycerol-3-phosphate catabolic process glycerol-3-phosphate dehydrogenase [NAD+] activity cofactor binding Transcription_related, Transcription regulator: SWI/SNF-BAF60b glycerol-3-phosphate shuttle TCA cycle II (plants and fungi) TCA cycle variation V (plant) MAPK signaling pathway - yeast Carbon fixation pathways in prokaryotes | details |
Expression profiles
 Show details about module gene expression profiling |