TreatCFM001243 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| pyruvate kinase activity | 0.007754948 | GO:0004743 |
| ATP binding | 0.007754948 | GO:0005524 |
| potassium ion binding | 0.007754948 | GO:0030955 |
| glycolysis | 0.018955652 | GO:0006096 |
| glycolysis I (from glucose 6-phosphate) | 0.015698336 | plantCyc |
| glycolysis IV (plant cytosol) | 0.015698336 | plantCyc |
| Herpes simplex infection | 0.032114139 | KEGG |
| Non-alcoholic fatty liver disease (NAFLD) | 0.032114139 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g090750.2 | T-complex protein 1 alpha subunit | AT3G20050 (0) |
| Solyc03g007810.2 | plastidic pyruvate kinase beta subunit 1 | AT5G52920 (0) |
| Solyc06g007570.2 | Ribosomal protein S8e family protein | AT5G59240 (9.00E-94) |
| Solyc11g033280.1 | eukaryotic initiation factor 4A-III | AT3G19760 (0) |
| Solyc11g069000.1 | TCP-1/cpn60 chaperonin family protein | AT5G20890 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000226 | unfolded protein binding protein folding ATP binding Ran_GTPase_binding | details |
| TreatCFM000817 | purine base biosynthetic process phosphoribosylamine-glycine ligase activity histidine biosynthetic process potassium ion binding pyruvate kinase activity unfolded protein binding histidine biosynthesis 2-oxoglutarate decarboxylation to succinyl-CoA 5-aminoimidazole ribonucleotide biosynthesis I glycine cleavage pyruvate decarboxylation to acetyl CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Valine, leucine and isoleucine degradation Antifolate resistance | details |
| TreatCFM001204 | histone_binding Transcription_related, Transcription factor: Alfin-like | details |
| TreatCFM001621 | DNA 5'-adenosine monophosphate hydrolase activity ligase activity, forming aminoacyl-tRNA and related compounds tRNA aminoacylation nucleosome assembly tRNA aminoacylation for protein translation aminoacyl-tRNA ligase activity DNA repair Ubiquitin_Proteasome_system, E3 adaptor: DWD tRNA charging Aminoacyl-tRNA biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |