TreatCFM001244 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription_related, Transcription regulator: C3H | 0.024415392 | gene family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.024415392 | gene family |
| Ubiquitin_Proteasome_system, E3 adaptor: BTB | 0.024415392 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g100410.2 | Iron-sulphur cluster biosynthesis family protein | AT5G03905 (4.00E-49) |
| Solyc03g111580.2 | Zinc finger C-x8-C-x5-C-x3-H type family protein | AT3G48440 (3.00E-95) |
| Solyc04g015740.2 | Protein of unknown function (DUF288) | AT2G41770 (0) |
| Solyc09g065640.2 | ETO1-like 1 | AT4G02680 (0) |
| Solyc12g005010.1 | AT1G50660 (6.00E-164) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000679 | translational initiation translation initiation factor activity transmembrane_transporter_activity formation of glycosidic bonds, GlycosylTransferases: GTnc xyloglucan biosynthesis | details |
| TreatCFM000773 | Transcription_related, Transcription regulator: C3H | details |
| TreatCFM000855 | Protein_kinases_phosphatases, PPC:4.1.6: Unknown Function Kinase Transcription_related, Transcription regulator: C3H | details |
| TreatCFM001070 | membrane beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity protein N-linked glycosylation formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY N-Glycan biosynthesis | details |
| TreatCFM001078 | small GTPase mediated signal transduction | details |
| TreatCFM001303 | lipid glycosylation metabolic process Transcription_related, Transcription factor: LIM indole-3-acetate activation I | details |
Expression profiles
 Show details about module gene expression profiling |