TreatCFM001249 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 0.002760721 | GO:0016717 |
| abscisic acid biosynthesis | 0.006324741 | plantCyc |
| trans-lycopene biosynthesis II (plants) | 0.006324741 | plantCyc |
| neoxanthin biosynthesis | 0.006324741 | plantCyc |
| Carotenoid biosynthesis | 0.000183582 | KEGG |
| Chemical carcinogenesis | 0.015819874 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g006430.2 | fatty acid desaturase 2 | AT3G12120 (1.00E-177) |
| Solyc02g086050.2 | abscisic acid (aba)-deficient 4 | AT1G67080 (2.00E-66) |
| Solyc02g093140.2 | Cystathionine beta-synthase (CBS) family protein | AT4G36910 (3.00E-68) |
| Solyc03g123760.2 | phytoene desaturase 3 | AT4G14210 (0) |
| Solyc05g050940.2 | glycoprotease 1 | AT2G45270 (0) |
| Solyc08g075100.2 | Protein of unknown function (DUF1350) | AT3G43540 (2.00E-94) |
| Solyc11g067160.1 | NAD(P)-linked oxidoreductase superfamily protein | AT2G27680 (7.00E-168) |
| Solyc12g007090.1 | AT5G19540 (3.00E-168) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000306 | CCAAT-binding factor complex oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water Transcription_related, Transcription factor: NF-YC glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) glycolysis I (from glucose 6-phosphate) gluconeogenesis I Alzheimer's disease | details |
| TreatCFM000318 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water intracellular | details |
| TreatCFM001075 | Golgi to plasma membrane transport exocyst tRNA modification tRNA (guanine-N7-)-methyltransferase activity phosphoglycerate kinase activity glycolysis xylose degradation I | details |
| TreatCFM001346 | trans-lycopene biosynthesis II (plants) Carotenoid biosynthesis Chemical carcinogenesis | details |
| TreatCFM001466 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | details |
| TreatCFM001649 | serine-type peptidase activity oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | details |
Expression profiles
 Show details about module gene expression profiling |