TreatCFM001300 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein ubiquitination | 0.016129843 | GO:0016567 |
| Ubiquitin_Proteasome_system, E3: U-box | 0.033017258 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g095570.2 | adenine nucleotide transporter 1 | AT4G01100 (1.00E-161) |
| Solyc02g071320.2 | ||
| Solyc03g116670.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G20190 (7.00E-39) |
| Solyc04g007640.2 | ARM repeat superfamily protein | AT1G71020 (0) |
| Solyc04g082060.2 | F-box family protein with a domain of unknown function (DUF295) | AT2G17030 (9.00E-33) |
| Solyc04g082320.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT1G76280 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000262 | nucleus nucleic acid binding transcription coactivator activity nucleobase-containing compound kinase activity DNA binding Transcription_related, Transcription regulator: Coactivator p15 Transcription_related, Transcription regulator: IWS1 adenosine ribonucleotides de novo biosynthesis Ribosome biogenesis in eukaryotes Herpes simplex infection | details |
| TreatCFM000362 | ligase activity Transcription_related, Transcription factor: C2C2-LSD Transcription_related, Transcription regulator: ARF Peptidoglycan biosynthesis | details |
| TreatCFM000981 | thiolester_hydrolase_activity pseudouridine synthesis RNA modification pseudouridine synthase activity fatty acid biosynthetic process drug transmembrane transport Transcription_related, Transcription factor: NF-YA oleate biosynthesis I (plants) Fatty acid biosynthesis Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM001150 | ATP binding | details |
Expression profiles
 Show details about module gene expression profiling |