TreatCFM001320 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein ubiquitination | 0.02673675 | GO:0016567 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.005073804 | gene family |
| Ubiquitin_Proteasome_system, E3: U-box | 0.027411753 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g006230.2 | Peptidase family C54 protein | AT3G59950 (9.00E-129) |
| Solyc04g071730.2 | syntaxin of plants 81 | AT1G51740 (1.00E-109) |
| Solyc05g052220.2 | RING/U-box superfamily protein | AT5G05230 (2.00E-74) |
| Solyc06g031690.2 | Ankyrin repeat family protein | AT2G26210 (2.00E-35) |
| Solyc07g044850.2 | transducin family protein / WD-40 repeat family protein | AT5G08560 (0) |
| Solyc08g074580.2 | repressor of lrx1 | AT2G44270 (1.00E-53) |
| Solyc08g080080.2 | FIZZY-related 2 | AT4G22910 (0) |
| Solyc09g098220.2 | DNA-binding HORMA family protein | AT1G16590 (2.00E-78) |
| Solyc10g081750.1 | AT2G35900 (4.00E-37) | |
| Solyc12g096340.1 | UDP-N-acetylglucosamine (UAA) transporter family | AT4G31600 (3.00E-116) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000290 | protein ubiquitination Ubiquitin_Proteasome_system, E3: U-box | details |
| TreatCFM000507 | histone_acetyltransferase_complex COPII vesicle coat Transcription_related, Transcription regulator: SWI/SNF-BAF60b Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000559 | Transcription_related, Transcription factor: bZIP | details |
Expression profiles
 Show details about module gene expression profiling |