TreatCFM001408 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| sialyltransferase activity | 0.002417753 | GO:0008373 |
| protein glycosylation | 0.038681093 | GO:0006486 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.002417753 | gene family |
| Glycosphingolipid biosynthesis - ganglio series | 0.002417753 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g087000.2 | ||
| Solyc04g008060.2 | vacuolar iron transporter 1 | AT2G01770 (4.00E-97) |
| Solyc05g023760.2 | Protein kinase superfamily protein | AT5G13290 (3.00E-131) |
| Solyc06g074370.1 | Glycosyltransferase family 29 (sialyltransferase) family protein | AT1G08280 (5.00E-120) |
| Solyc08g016190.2 | Ribosomal protein L18ae family | |
| Solyc08g016200.2 | Ribosomal protein L18ae family | |
| Solyc10g011820.2 | Fatty acid/sphingolipid desaturase | AT2G46210 (4.00E-139) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000448 | adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 | details |
| TreatCFM000838 | proton-transporting two-sector ATPase complex, catalytic domain translational initiation proton transport ATP metabolic process ATP hydrolysis coupled proton transport cytoplasm translation initiation factor activity hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances N-acetyltransferase_activity Transcription_related, Transcription regulator: GNAT Transcription_related, Transcription regulator: HB adenosine ribonucleotides de novo biosynthesis Epstein-Barr virus infection | details |
| TreatCFM000867 | phospholipid metabolic process deoxyribonucleoside diphosphate metabolic process sialyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III phospholipid remodeling (phosphatidylcholine, yeast) phosphatidylcholine acyl editing triacylglycerol biosynthesis Glycosphingolipid biosynthesis - ganglio series Ether lipid metabolism | details |
| TreatCFM000903 | deoxyribonucleoside diphosphate metabolic process dUTP metabolic process Ubiquitin_Proteasome_system, E3 adaptor: DWD pyrimidine deoxyribonucleotides de novo biosynthesis II pyrimidine deoxyribonucleotides dephosphorylation superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) pyrimidine deoxyribonucleotides de novo biosynthesis I Pyrimidine metabolism Herpes simplex infection | details |
| TreatCFM001173 | Transcription_related, Transcription factor: GRAS Transcription_related, Transcription factor: bHLH Other glycan degradation | details |
| TreatCFM001290 | details |
Expression profiles
 Show details about module gene expression profiling |