TreatCFM001417 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| spliceosomal complex | 0.002732396 | GO:0005681 |
| nuclear mRNA splicing, via spliceosome | 0.019385346 | GO:0000398 |
| cell redox homeostasis | 0.027438806 | GO:0045454 |
| Transcription_related, Transcription factor: TCP | 0.005315469 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g008070.2 | Protein of unknown function (DUF1350) | AT5G47860 (2.00E-160) |
| Solyc02g068200.1 | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 | AT3G27010 (2.00E-47) |
| Solyc03g025340.1 | Calcium-dependent lipid-binding (CaLB domain) family protein | AT5G23950 (5.00E-35) |
| Solyc04g009230.2 | mRNA splicing factor, thioredoxin-like U5 snRNP | AT5G08290 (6.00E-80) |
| Solyc05g052260.2 | appr-1-p processing enzyme family protein | AT2G40600 (1.00E-84) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000456 | Transcription_related, Transcription factor: TCP | details |
| TreatCFM001008 | regulation of transcription, DNA-dependent Transcription_related, Transcription factor: CSD Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase Transcription_related, Transcription factor: WRKY Drug metabolism - other enzymes | details |
| TreatCFM001107 | alpha-amylase activity cation binding Ubiquitin_Proteasome_system, E3 adaptor: DWD UDP-L-arabinose biosynthesis II (from L-arabinose) lysine degradation II mevalonate pathway I Carbohydrate digestion and absorption Two-component system hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001474 | methionine metabolic process tetrahydrofolate_biosynthetic_process methylenetetrahydrofolate reductase (NADPH) activity GTP_cyclohydrolase_I_activity cytoplasm Transcription_related, Transcription factor: TCP 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II folate transformations II Folate biosynthesis Ubiquinone and other terpenoid-quinone biosynthesis Antifolate resistance | details |
Expression profiles
 Show details about module gene expression profiling |