TreatCFM001531 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| tRNA aminoacylation | 0.002071316 | GO:0043039 |
| tRNA binding | 0.008883964 | GO:0000049 |
| exonuclease activity | 0.008883964 | GO:0004527 |
| cytoplasm | 0.026818448 | GO:0005737 |
| aminoacyl-tRNA ligase activity | 0.037970139 | GO:0004812 |
| tRNA charging | 0.010834567 | plantCyc |
| Aminoacyl-tRNA biosynthesis | 0.011861309 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc06g009530.2 | Carbohydrate-binding-like fold | AT3G62360 (0) |
| Solyc07g025210.1 | pentatricopeptide (PPR) repeat-containing protein | AT1G19520 (3.00E-79) |
| Solyc08g066580.2 | AT4G32910 (0) | |
| Solyc10g007060.2 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative | AT4G39280 (0) |
| Solyc12g042990.1 | CASC3/Barentsz eIF4AIII binding | AT1G80000 (2.00E-39) |
| Solyc12g089280.1 | 5\'-3\' exoribonuclease 3 | AT1G75660 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001176 | glycerol metabolic process tRNA aminoacylation glycerone kinase activity tRNA binding cytoplasm aminoacyl-tRNA ligase activity Transcription_related, Transcription regulator: SNF2 tRNA charging Aminoacyl-tRNA biosynthesis RIG-I-like receptor signaling pathway | details |
| TreatCFM001530 | tRNA aminoacylation tRNA binding microtubule-based movement microtubule motor activity aminoacyl-tRNA ligase activity microtubule binding ATP binding tRNA charging Aminoacyl-tRNA biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |