TreatCFM001542 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ER_membrane_protein_complex | 0.005037421 | GO:0072546 |
| dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 0.01184699 | GO:0004579 |
| nucleus | 0.017114864 | GO:0005634 |
| endoplasmic reticulum | 0.020092339 | GO:0005783 |
| protein glycosylation | 0.038681093 | GO:0006486 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.042730707 | gene family |
| Protein processing in endoplasmic reticulum | 0.00663219 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g090470.2 | rRNA processing protein-related | AT5G61330 (6.00E-113) |
| Solyc01g109350.2 | transducin family protein / WD-40 repeat family protein | AT3G18860 (0) |
| Solyc04g082670.2 | Ribophorin I | AT1G76400 (0) |
| Solyc08g063050.2 | FTSH protease 4 | AT2G26140 (0) |
| Solyc08g078600.2 | SIN-like family protein | AT5G49530 (2.00E-114) |
| Solyc09g008610.2 | catalytics | AT5G11560 (0) |
| Solyc09g074060.2 | BSD domain-containing protein | AT1G03350 (2.00E-57) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000158 | translational initiation translation initiation factor activity | details |
| TreatCFM000283 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein binding mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD Transcription_related, Transcription regulator: SWI/SNF-BAF60b Ubiquitin_Proteasome_system, E3 adaptor: Cullin Transcription_related, Transcription factor: SBP GDP-mannose biosynthesis tetrapyrrole biosynthesis I (from glutamate) L-ascorbate biosynthesis I (L-galactose pathway) Protein processing in endoplasmic reticulum Biofilm formation - Pseudomonas aeruginosa hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000997 | nucleus formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: SNF2 | details |
| TreatCFM001091 | protein insertion into membrane protein folding unfolded protein binding | details |
| TreatCFM001352 | Transcription_related, Transcription factor: OFP Transcription_related, Transcription regulator: SWI/SNF-BAF60b Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM001401 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein glycosylation endoplasmic reticulum Ubiquitin_Proteasome_system, E3 adaptor: DWD Protein processing in endoplasmic reticulum | details |
| TreatCFM001590 | Golgi vesicle transport endoplasmic reticulum Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM001591 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein glycosylation DNA-directed RNA polymerase activity endoplasmic reticulum transcription, DNA-dependent Transcription_related, Transcription factor: C2H2 Protein processing in endoplasmic reticulum | details |
| TreatCFM001650 | nucleus protein_sumoylation cellular response to extracellular stimulus cell growth SUMO_transferase_activity Transcription_related, Transcription regulator: PHD Herpes simplex infection | details |
Expression profiles
 Show details about module gene expression profiling |