LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE008260

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE008260

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE008260AT5G06720.1peroxidase 21positive
GWHGAAZE001607AT3G13610.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.97positive
GWHGAAZE008406----0.96positive
GWHGAAZE011966AT3G47110.1Leucine-rich repeat protein kinase family protein0.96positive
GWHGAAZE005491AT2G37820.1Cysteine/Histidine-rich C1 domain family protein0.96positive
GWHGAAZE020028AT2G29120.1glutamate receptor 2.70.96positive
GWHGAAZE019524AT1G21270.1wall-associated kinase 20.96positive
GWHGAAZE005329AT5G05340.1Peroxidase superfamily protein0.95positive
GWHGAAZE029230AT1G47980.1desiccation-like protein;(source:Araport11)0.95positive
GWHGAAZE005004AT1G79460.1Terpenoid cyclases/Protein prenyltransferases superfamily protein0.95positive
GWHGAAZE011651AT3G23250.2myb domain protein 150.95positive
GWHGAAZE010448AT5G52390.1PAR1 protein0.95positive
GWHGAAZE017700AT3G48520.1cytochrome P450, family 94, subfamily B, polypeptide 30.94positive
GWHGAAZE011247AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.94positive
GWHGAAZE029294AT4G34135.1UDP-glucosyltransferase 73B20.94positive
GWHGAAZE028998----0.94positive
GWHGAAZE001797AT4G02780.1Terpenoid cyclases/Protein prenyltransferases superfamily protein0.94positive
GWHGAAZE008259AT5G06720.1peroxidase 20.94positive
GWHGAAZE007083AT1G51570.1Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein0.93positive
GWHGAAZE012267AT3G06720.2importin alpha isoform 10.93positive
GWHGAAZE010495AT2G01050.1zinc ion binding;nucleic acid binding0.93positive
GWHGAAZE011527AT5G17680.1disease resistance protein (TIR-NBS-LRR class), putative0.93positive
GWHGAAZE021002AT5G47650.1nudix hydrolase homolog 20.93positive
GWHGAAZE020920ATMG00860.1DNA/RNA polymerases superfamily protein0.93positive
GWHGAAZE026154AT2G29120.1glutamate receptor 2.70.93positive
GWHGAAZE014430AT3G02100.1UDP-Glycosyltransferase superfamily protein0.93positive
GWHGAAZE023668AT2G34930.1disease resistance family protein / LRR family protein0.93positive
GWHGAAZE008974AT4G33790.1Jojoba acyl CoA reductase-related male sterility protein0.93positive
GWHGAAZE016061AT1G77290.2Glutathione S-transferase family protein0.93positive
GWHGAAZE031790AT5G01860.1C2H2 and C2HC zinc fingers superfamily protein0.93positive
GWHGAAZE010529AT2G40030.1nuclear RNA polymerase D1B0.93positive
GWHGAAZE011217AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.93positive
GWHGAAZE017179AT5G61480.1Leucine-rich repeat protein kinase family protein0.93positive
GWHGAAZE009645AT1G04040.1HAD superfamily, subfamily IIIB acid phosphatase 0.93positive
GWHGAAZE013583AT4G36250.1aldehyde dehydrogenase 3F10.93positive
GWHGAAZE011166AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.93positive
GWHGAAZE017956AT5G63110.1histone deacetylase 60.93positive
GWHGAAZE013364AT1G68510.1LOB domain-containing protein 420.93positive
GWHGAAZE013245AT1G31690.1Copper amine oxidase family protein0.93positive
GWHGAAZE031309AT5G42800.1dihydroflavonol 4-reductase0.93positive
GWHGAAZE020389AT1G63430.2Leucine-rich repeat protein kinase family protein0.93positive
GWHGAAZE019100----0.93positive
GWHGAAZE029538AT3G10270.1DNA GYRASE B10.92positive
GWHGAAZE016067AT1G11050.1Protein kinase superfamily protein0.92positive
GWHGAAZE001962AT5G51160.1Ankyrin repeat family protein0.92positive
GWHGAAZE020400AT2G34930.1disease resistance family protein / LRR family protein0.92positive
GWHGAAZE003608AT2G46150.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.92positive
GWHGAAZE004351AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.92positive
GWHGAAZE016901AT1G49230.1RING/U-box superfamily protein0.92positive
GWHGAAZE027274AT5G55090.1mitogen-activated protein kinase kinase kinase 150.92positive
GWHGAAZE028991AT4G12010.1Disease resistance protein (TIR-NBS-LRR class) family0.92positive
GWHGAAZE025785AT5G56960.1basic helix-loop-helix (bHLH) DNA-binding family protein0.92positive
GWHGAAZE018565AT4G34131.1UDP-glucosyl transferase 73B30.92positive
GWHGAAZE033628AT5G17680.1disease resistance protein (TIR-NBS-LRR class), putative0.91positive
GWHGAAZE008777----0.91positive
GWHGAAZE022832AT5G62740.1SPFH/Band 7/PHB domain-containing membrane-associated protein family0.91positive
GWHGAAZE003531AT3G47460.1Structural maintenance of chromosomes (SMC) family protein0.91positive
GWHGAAZE015371AT1G14520.2myo-inositol oxygenase 10.91positive
GWHGAAZE027706AT2G28990.1Leucine-rich repeat protein kinase family protein0.91positive
GWHGAAZE015781AT3G47570.1Leucine-rich repeat protein kinase family protein0.91positive
GWHGAAZE020003AT2G29120.1glutamate receptor 2.70.91positive
GWHGAAZE019658AT4G34135.1UDP-glucosyltransferase 73B20.91positive
GWHGAAZE019030AT1G71400.1receptor like protein 120.91positive
GWHGAAZE013776AT1G20990.1Cysteine/Histidine-rich C1 domain family protein0.9positive
GWHGAAZE009090AT3G48195.1Phox (PX) domain-containing protein0.9positive
GWHGAAZE021162AT3G23750.1Leucine-rich repeat protein kinase family protein0.9positive
GWHGAAZE000168AT4G13420.1high affinity K+ transporter 50.9positive
GWHGAAZE025415AT1G76650.3calmodulin-like 380.9positive
GWHGAAZE026155AT2G29120.1glutamate receptor 2.70.9positive
GWHGAAZE008751AT4G38830.1cysteine-rich RLK (RECEPTOR-like protein kinase) 260.9positive
GWHGAAZE022721AT2G26710.1Cytochrome P450 superfamily protein0.9positive
GWHGAAZE015696AT2G41820.1Leucine-rich repeat protein kinase family protein0.9positive
GWHGAAZE010520AT4G16960.1Disease resistance protein (TIR-NBS-LRR class) family0.9positive
GWHGAAZE025789AT4G33050.3calmodulin-binding family protein0.89positive
GWHGAAZE004241AT3G04030.2Homeodomain-like superfamily protein0.89positive
GWHGAAZE005509AT3G21420.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.89positive
GWHGAAZE021007AT5G47650.1nudix hydrolase homolog 20.89positive
GWHGAAZE014590AT5G44210.1erf domain protein 90.89positive
GWHGAAZE004408AT3G05950.1RmlC-like cupins superfamily protein0.89positive
GWHGAAZE008978AT1G74110.1cytochrome P450, family 78, subfamily A, polypeptide 100.89positive
GWHGAAZE000783AT2G28710.1C2H2-type zinc finger family protein0.89positive
GWHGAAZE028472AT1G10340.2Ankyrin repeat family protein0.89positive
GWHGAAZE020990AT5G16740.1Transmembrane amino acid transporter family protein0.89positive
GWHGAAZE011843AT1G47480.1alpha/beta-Hydrolases superfamily protein0.89positive
GWHGAAZE003515AT3G61060.1phloem protein 2-A130.89positive
GWHGAAZE033444AT4G36150.1Disease resistance protein (TIR-NBS-LRR class) family0.89positive
GWHGAAZE000869AT1G07900.1LOB domain-containing protein 10.89positive
GWHGAAZE028350AT4G38830.1cysteine-rich RLK (RECEPTOR-like protein kinase) 260.89positive
GWHGAAZE020020AT2G29120.1glutamate receptor 2.70.89positive
GWHGAAZE004737AT4G21440.1MYB-like 1020.88positive
GWHGAAZE010324AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.88positive
GWHGAAZE017082----0.88positive
GWHGAAZE005484AT3G53960.1Major facilitator superfamily protein0.88positive
GWHGAAZE011022AT2G40250.1SGNH hydrolase-type esterase superfamily protein0.88positive
GWHGAAZE010423AT2G32390.3glutamate receptor 3.50.88positive
GWHGAAZE013025AT3G09020.1alpha 1,4-glycosyltransferase family protein0.88positive
GWHGAAZE004407AT3G05950.1RmlC-like cupins superfamily protein0.88positive
GWHGAAZE016517AT4G31940.1cytochrome P450, family 82, subfamily C, polypeptide 40.87positive
GWHGAAZE020076AT3G26040.1HXXXD-type acyl-transferase family protein0.87positive
GWHGAAZE005382AT2G38290.1ammonium transporter 20.87positive
GWHGAAZE024517AT3G02645.1Plant protein of unknown function (DUF247)0.87positive
GWHGAAZE026156AT2G29100.1glutamate receptor 2.90.87positive
GWHGAAZE006001AT2G46150.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.87positive
GWHGAAZE020425AT2G34930.1disease resistance family protein / LRR family protein0.87positive
GWHGAAZE016514AT4G31950.1cytochrome P450, family 82, subfamily C, polypeptide 30.87positive
GWHGAAZE028809AT5G16080.1carboxyesterase 170.87positive
GWHGAAZE003276AT2G39980.1HXXXD-type acyl-transferase family protein0.87positive
GWHGAAZE026574AT1G45616.1receptor like protein 60.87positive
GWHGAAZE032641AT2G36430.1Plant protein of unknown function (DUF247)0.87positive
GWHGAAZE028782AT4G31980.1PPPDE thiol peptidase family protein;(source:Araport11)0.86positive
GWHGAAZE002578AT1G78510.2solanesyl diphosphate synthase 10.86positive
GWHGAAZE012485AT1G68040.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.86positive
GWHGAAZE031549AT4G01410.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.86positive
GWHGAAZE004410AT3G05950.1RmlC-like cupins superfamily protein0.86positive
GWHGAAZE024811AT2G46510.1ABA-inducible BHLH-type transcription factor0.86positive
GWHGAAZE031005AT1G73040.1Mannose-binding lectin superfamily protein0.86positive
GWHGAAZE033567AT5G51990.1C-repeat-binding factor 40.86positive
GWHGAAZE007301AT5G65790.1myb domain protein 680.86positive
GWHGAAZE020077AT3G26040.1HXXXD-type acyl-transferase family protein0.86positive


Expression profiling, GSEA and motif analysis